KEGG   PATHWAY: mjv03022
Entry
mjv03022                    Pathway                                
Name
Basal transcription factors - Manis javanica (Malayan pangolin)
Class
Genetic Information Processing; Transcription
Pathway map
mjv03022  Basal transcription factors
mjv03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Manis javanica (Malayan pangolin) [GN:mjv]
Gene
108407928  GTF2A1; transcription initiation factor IIA subunit 1 [KO:K03122]
108384954  GTF2A1L; TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
108402118  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
108403504  transcription initiation factor IIA subunit 2-like [KO:K03123]
108408869  GTF2B; transcription initiation factor IIB [KO:K03124]
108402561  TATA-box-binding protein [KO:K03120]
108386588  TBPL1; TATA box-binding protein-like 1 [KO:K03120]
108394219  TBPL2; TATA box-binding protein-like 2 [KO:K03120]
108403316  TAF1; transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
118971528  transcription initiation factor TFIID subunit 1-like isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
108400592  TAF2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
108397786  TAF7L; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 7-like [KO:K03132]
108395088  TAF7; transcription initiation factor TFIID subunit 7 [KO:K03132]
108405337  TAF8; transcription initiation factor TFIID subunit 8 isoform X4 [KO:K14649]
108395617  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
108384229  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
108408084  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1 [KO:K03130]
108396967  TAF5; transcription initiation factor TFIID subunit 5 [KO:K03130]
108396695  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
108408784  TAF4B; transcription initiation factor TFIID subunit 4B isoform X1 [KO:K03129]
108402902  TAF12; transcription initiation factor TFIID subunit 12 isoform X2 [KO:K03126]
108393637  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
108392033  transcription initiation factor TFIID subunit 6 [KO:K03131]
118971205  transcription initiation factor TFIID subunit 6 [KO:K03131]
108403640  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 9 [KO:K14535]
118973847  TAF9; transcription initiation factor TFIID subunit 9 [KO:K14535]
108404774  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K03133]
108406084  TAF11; transcription initiation factor TFIID subunit 11 [KO:K03135]
108395574  TAF13; transcription initiation factor TFIID subunit 13 isoform X1 [KO:K03127]
108407506  TAF15; TATA-binding protein-associated factor 2N isoform X8 [KO:K14651]
108391600  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
108406196  GTF2F1; general transcription factor IIF subunit 1 isoform X1 [KO:K03138]
108398137  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
108405101  GTF2H1; general transcription factor IIH subunit 1 isoform X1 [KO:K03141]
108384354  general transcription factor IIH subunit 2 [KO:K03142]
108401683  GTF2H3; general transcription factor IIH subunit 3 [KO:K03143]
108409887  GTF2H4; general transcription factor IIH subunit 4 isoform X1 [KO:K03144]
108387328  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB isoform X1 [KO:K10843] [EC:5.6.2.4]
108391018  ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X1 [KO:K10844] [EC:5.6.2.3]
108389688  LOW QUALITY PROTEIN: general transcription factor IIH subunit 5-like [KO:K10845]
108383293  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
108410272  MNAT1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
108394496  CCNH; cyclin-H isoform X1 [KO:K06634]
108390668  general transcription factor II-I isoform X2 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
mjv03020  RNA polymerase
mjv03420  Nucleotide excision repair
KO pathway
ko03022   
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