KEGG   PATHWAY: mtuu03430
Entry
mtuu03430                   Pathway                                
Name
Mismatch repair - Mycobacterium tuberculosis BT2
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
mtuu03430  Mismatch repair
mtuu03430

Other DBs
GO: 0006298
Organism
Mycobacterium tuberculosis BT2 [GN:mtuu]
Gene
HKBT2_3376  uvrD2; putative ATP dependent DNA helicase UvrD2 [KO:K03657] [EC:5.6.2.4]
HKBT2_3380  UvrD/Rep family helicase [KO:K03657] [EC:5.6.2.4]
HKBT2_1000  uvrD1; ATP-dependent DNA helicase II [KO:K03657] [EC:5.6.2.4]
HKBT2_1180  xseA; exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
HKBT2_1179  xseB; exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
HKBT2_2620  hypothetical protein [KO:K03111]
HKBT2_0059  ssb; single-strand binding protein [KO:K03111]
HKBT2_1655  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
HKBT2_0004  dnaN; DNA polymerase subunit III beta [KO:K02338] [EC:2.7.7.7]
HKBT2_3937  dnaZX; DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
HKBT2_2550  hypothetical protein [KO:K02340] [EC:2.7.7.7]
HKBT2_3854  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
HKBT2_3927  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
HKBT2_2313  hypothetical protein [KO:K02342] [EC:2.7.7.7]
HKBT2_3171  ligA; NAD-dependent DNA ligase LigA [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
LinkDB

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