KEGG   PATHWAY: npd03022
Entry
npd03022                    Pathway                                
Name
Basal transcription factors - Nothoprocta perdicaria (Chilean tinamou)
Class
Genetic Information Processing; Transcription
Pathway map
npd03022  Basal transcription factors
npd03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Nothoprocta perdicaria (Chilean tinamou) [GN:npd]
Gene
112954806  GTF2A1L; TFIIA-alpha and beta-like factor [KO:K03122]
112954993  GTF2A1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
112958606  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
112946234  GTF2B; transcription initiation factor IIB [KO:K03124]
112954931  TBPL1; TATA box-binding protein-like protein 1 isoform X1 [KO:K03120]
112957811  TBPL2; TATA box-binding protein-like protein 2 isoform X1 [KO:K03120]
112959386  TBP; TATA-box-binding protein [KO:K03120]
112948640  TAF1; transcription initiation factor TFIID subunit 1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
112948499  TAF2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
112960413  TAF7L; transcription initiation factor TFIID subunit 7-like [KO:K03132]
112959199  TAF8; transcription initiation factor TFIID subunit 8 [KO:K14649]
112958571  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
112957112  TAF5; transcription initiation factor TFIID subunit 5 [KO:K03130]
112959384  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
112949053  TAF4B; transcription initiation factor TFIID subunit 4B [KO:K03129]
112949705  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
112944971  transcription initiation factor TFIID subunit 4-like [KO:K03129]
112950924  TAF12; transcription initiation factor TFIID subunit 12 [KO:K03126]
112951203  TAF6; transcription initiation factor TFIID subunit 6 [KO:K03131]
112960415  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K14535]
112959147  TAF11; transcription initiation factor TFIID subunit 11 [KO:K03135]
112945592  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
112945381  TAF15; TATA-binding protein-associated factor 2N [KO:K14651]
112942532  general transcription factor IIE subunit 1-like [KO:K03136]
112956895  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
112953456  GTF2E2; transcription initiation factor IIE subunit beta [KO:K03137]
112948210  GTF2F2; general transcription factor IIF subunit 2 isoform X1 [KO:K03139] [EC:5.6.2.-]
112951461  GTF2H1; general transcription factor IIH subunit 1 [KO:K03141]
112944632  general transcription factor IIH subunit 2 [KO:K03142]
112945801  GTF2H3; general transcription factor IIH subunit 3 [KO:K03143]
112949223  GTF2H4; LOW QUALITY PROTEIN: general transcription factor IIH subunit 4 [KO:K03144]
112959707  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB isoform X1 [KO:K10843] [EC:5.6.2.4]
112956262  ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
112951655  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
112944097  CDK7; cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
112959697  MNAT1; CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
112945615  CCNH; cyclin-H [KO:K06634]
112956686  GTF2I; general transcription factor II-I [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
npd03020  RNA polymerase
npd03420  Nucleotide excision repair
KO pathway
ko03022   
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