PATHWAY: palv01100 Help Entry palv01100                   Pathway                                 Name Metabolic pathways - Pseudomonas alvandae Class BRITE hierarchy Pathway map palv01100   Metabolic pathways Module palv_M00002   Glycolysis, core module involving three-carbon compounds [PATH:palv01100] palv_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:palv01100] palv_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:palv01100] palv_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:palv01100] palv_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:palv01100] palv_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:palv01100] palv_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:palv01100] palv_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:palv01100] palv_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:palv01100] palv_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:palv01100] palv_M00015   Proline biosynthesis, glutamate => proline [PATH:palv01100] palv_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:palv01100] palv_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:palv01100] palv_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:palv01100] palv_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:palv01100] palv_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:palv01100] palv_M00021   Cysteine biosynthesis, serine => cysteine [PATH:palv01100] palv_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:palv01100] palv_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:palv01100] palv_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:palv01100] palv_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:palv01100] palv_M00034   Methionine salvage pathway [PATH:palv01100] palv_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:palv01100] palv_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:palv01100] palv_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:palv01100] palv_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:palv01100] palv_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:palv01100] palv_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:palv01100] palv_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:palv01100] palv_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:palv01100] palv_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:palv01100] palv_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:palv01100] palv_M00063   CMP-KDO biosynthesis [PATH:palv01100] palv_M00082   Fatty acid biosynthesis, initiation [PATH:palv01100] palv_M00083   Fatty acid biosynthesis, elongation [PATH:palv01100] palv_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:palv01100] palv_M00087   beta-Oxidation [PATH:palv01100] palv_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:palv01100] palv_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:palv01100] palv_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:palv01100] palv_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:palv01100] palv_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:palv01100] palv_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:palv01100] palv_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:palv01100] palv_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:palv01100] palv_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:palv01100] palv_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:palv01100] palv_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:palv01100] palv_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:palv01100] palv_M00149   Succinate dehydrogenase, prokaryotes [PATH:palv01100] palv_M00151   Cytochrome bc1 complex respiratory unit [PATH:palv01100] palv_M00155   Cytochrome c oxidase, prokaryotes [PATH:palv01100] palv_M00156   Cytochrome c oxidase, cbb3-type [PATH:palv01100] palv_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:palv01100] palv_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:palv01100] palv_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:palv01100] palv_M00417   Cytochrome o ubiquinol oxidase [PATH:palv01100] palv_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:palv01100] palv_M00529   Denitrification, nitrate => nitrogen [PATH:palv01100] palv_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:palv01100] palv_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:palv01100] palv_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:palv01100] palv_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:palv01100] palv_M00555   Betaine biosynthesis, choline => betaine [PATH:palv01100] palv_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:palv01100] palv_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:palv01100] palv_M00621   Glycine cleavage system [PATH:palv01100] palv_M00793   dTDP-L-rhamnose biosynthesis [PATH:palv01100] palv_M00844   Arginine biosynthesis, ornithine => arginine [PATH:palv01100] palv_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:palv01100] palv_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:palv01100] palv_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:palv01100] palv_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:palv01100] palv_M00919   Ectoine degradation, ectoine => aspartate [PATH:palv01100] palv_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:palv01100] palv_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:palv01100] palv_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:palv01100] palv_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:palv01100] palv_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:palv01100] palv_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:palv01100] palv_M00970   Proline degradation, proline => glutamate [PATH:palv01100] palv_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:palv01100] Organism Pseudomonas alvandae [GN:palv] Related pathway palv00010   Glycolysis / Gluconeogenesis palv00020   Citrate cycle (TCA cycle) palv00030   Pentose phosphate pathway palv00040   Pentose and glucuronate interconversions palv00051   Fructose and mannose metabolism palv00052   Galactose metabolism palv00053   Ascorbate and aldarate metabolism palv00061   Fatty acid biosynthesis palv00071   Fatty acid degradation palv00130   Ubiquinone and other terpenoid-quinone biosynthesis palv00190   Oxidative phosphorylation palv00220   Arginine biosynthesis palv00230   Purine metabolism palv00240   Pyrimidine metabolism palv00250   Alanine, aspartate and glutamate metabolism palv00260   Glycine, serine and threonine metabolism palv00261   Monobactam biosynthesis palv00270   Cysteine and methionine metabolism palv00280   Valine, leucine and isoleucine degradation palv00290   Valine, leucine and isoleucine biosynthesis palv00300   Lysine biosynthesis palv00310   Lysine degradation palv00330   Arginine and proline metabolism palv00332   Carbapenem biosynthesis palv00340   Histidine metabolism palv00350   Tyrosine metabolism palv00360   Phenylalanine metabolism palv00361   Chlorocyclohexane and chlorobenzene degradation palv00362   Benzoate degradation palv00380   Tryptophan metabolism palv00400   Phenylalanine, tyrosine and tryptophan biosynthesis palv00401   Novobiocin biosynthesis palv00410   beta-Alanine metabolism palv00430   Taurine and hypotaurine metabolism palv00450   Selenocompound metabolism palv00460   Cyanoamino acid metabolism palv00470   D-Amino acid metabolism palv00480   Glutathione metabolism palv00500   Starch and sucrose metabolism palv00520   Amino sugar and nucleotide sugar metabolism palv00521   Streptomycin biosynthesis palv00523   Polyketide sugar unit biosynthesis palv00525   Acarbose and validamycin biosynthesis palv00540   Lipopolysaccharide biosynthesis palv00541   O-Antigen nucleotide sugar biosynthesis palv00543   Exopolysaccharide biosynthesis palv00550   Peptidoglycan biosynthesis palv00552   Teichoic acid biosynthesis palv00561   Glycerolipid metabolism palv00562   Inositol phosphate metabolism palv00564   Glycerophospholipid metabolism palv00592   alpha-Linolenic acid metabolism palv00620   Pyruvate metabolism palv00621   Dioxin degradation palv00622   Xylene degradation palv00623   Toluene degradation palv00625   Chloroalkane and chloroalkene degradation palv00626   Naphthalene degradation palv00627   Aminobenzoate degradation palv00630   Glyoxylate and dicarboxylate metabolism palv00633   Nitrotoluene degradation palv00640   Propanoate metabolism palv00643   Styrene degradation palv00650   Butanoate metabolism palv00660   C5-Branched dibasic acid metabolism palv00670   One carbon pool by folate palv00680   Methane metabolism palv00710   Carbon fixation by Calvin cycle palv00720   Other carbon fixation pathways palv00730   Thiamine metabolism palv00740   Riboflavin metabolism palv00750   Vitamin B6 metabolism palv00760   Nicotinate and nicotinamide metabolism palv00770   Pantothenate and CoA biosynthesis palv00780   Biotin metabolism palv00785   Lipoic acid metabolism palv00790   Folate biosynthesis palv00791   Atrazine degradation palv00860   Porphyrin metabolism palv00900   Terpenoid backbone biosynthesis palv00907   Pinene, camphor and geraniol degradation palv00910   Nitrogen metabolism palv00920   Sulfur metabolism palv00930   Caprolactam degradation palv00946   Degradation of flavonoids palv00984   Steroid degradation palv00996   Biosynthesis of various alkaloids palv00997   Biosynthesis of various other secondary metabolites palv00999   Biosynthesis of various plant secondary metabolites palv01040   Biosynthesis of unsaturated fatty acids palv01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     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