KEGG   PATHWAY: pgd01100
Entry
pgd01100                    Pathway                                
Name
Metabolic pathways - Phaeobacter gallaeciensis DSM 26640
Class
Pathway map
pgd01100  Metabolic pathways
pgd01100

Module
pgd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pgd01100]
pgd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pgd01100]
pgd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pgd01100]
pgd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pgd01100]
pgd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pgd01100]
pgd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pgd01100]
pgd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pgd01100]
pgd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pgd01100]
pgd_M00015  Proline biosynthesis, glutamate => proline [PATH:pgd01100]
pgd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pgd01100]
pgd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pgd01100]
pgd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pgd01100]
pgd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pgd01100]
pgd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pgd01100]
pgd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pgd01100]
pgd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pgd01100]
pgd_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pgd01100]
pgd_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pgd01100]
pgd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pgd01100]
pgd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pgd01100]
pgd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pgd01100]
pgd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pgd01100]
pgd_M00082  Fatty acid biosynthesis, initiation [PATH:pgd01100]
pgd_M00083  Fatty acid biosynthesis, elongation [PATH:pgd01100]
pgd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pgd01100]
pgd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:pgd01100]
pgd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pgd01100]
pgd_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pgd01100]
pgd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pgd01100]
pgd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pgd01100]
pgd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pgd01100]
pgd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pgd01100]
pgd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pgd01100]
pgd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pgd01100]
pgd_M00140  C1-unit interconversion, prokaryotes [PATH:pgd01100]
pgd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pgd01100]
pgd_M00149  Succinate dehydrogenase, prokaryotes [PATH:pgd01100]
pgd_M00151  Cytochrome bc1 complex respiratory unit [PATH:pgd01100]
pgd_M00155  Cytochrome c oxidase, prokaryotes [PATH:pgd01100]
pgd_M00156  Cytochrome c oxidase, cbb3-type [PATH:pgd01100]
pgd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pgd01100]
pgd_M00169  CAM (Crassulacean acid metabolism), light [PATH:pgd01100]
pgd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pgd01100]
pgd_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pgd01100]
pgd_M00373  Ethylmalonyl pathway [PATH:pgd01100]
pgd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pgd01100]
pgd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pgd01100]
pgd_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pgd01100]
pgd_M00555  Betaine biosynthesis, choline => betaine [PATH:pgd01100]
pgd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pgd01100]
pgd_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pgd01100]
pgd_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pgd01100]
pgd_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:pgd01100]
pgd_M00621  Glycine cleavage system [PATH:pgd01100]
pgd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pgd01100]
pgd_M00793  dTDP-L-rhamnose biosynthesis [PATH:pgd01100]
pgd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pgd01100]
pgd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pgd01100]
pgd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pgd01100]
pgd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pgd01100]
pgd_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:pgd01100]
pgd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pgd01100]
pgd_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pgd01100]
pgd_M00970  Proline degradation, proline => glutamate [PATH:pgd01100]
Organism
Phaeobacter gallaeciensis DSM 26640 [GN:pgd]
Related
pathway
pgd00010  Glycolysis / Gluconeogenesis
pgd00020  Citrate cycle (TCA cycle)
pgd00030  Pentose phosphate pathway
pgd00040  Pentose and glucuronate interconversions
pgd00051  Fructose and mannose metabolism
pgd00052  Galactose metabolism
pgd00053  Ascorbate and aldarate metabolism
pgd00061  Fatty acid biosynthesis
pgd00071  Fatty acid degradation
pgd00074  Mycolic acid biosynthesis
pgd00100  Steroid biosynthesis
pgd00121  Secondary bile acid biosynthesis
pgd00130  Ubiquinone and other terpenoid-quinone biosynthesis
pgd00190  Oxidative phosphorylation
pgd00220  Arginine biosynthesis
pgd00230  Purine metabolism
pgd00240  Pyrimidine metabolism
pgd00250  Alanine, aspartate and glutamate metabolism
pgd00260  Glycine, serine and threonine metabolism
pgd00261  Monobactam biosynthesis
pgd00270  Cysteine and methionine metabolism
pgd00280  Valine, leucine and isoleucine degradation
pgd00290  Valine, leucine and isoleucine biosynthesis
pgd00300  Lysine biosynthesis
pgd00310  Lysine degradation
pgd00330  Arginine and proline metabolism
pgd00332  Carbapenem biosynthesis
pgd00340  Histidine metabolism
pgd00350  Tyrosine metabolism
pgd00360  Phenylalanine metabolism
pgd00361  Chlorocyclohexane and chlorobenzene degradation
pgd00362  Benzoate degradation
pgd00364  Fluorobenzoate degradation
pgd00380  Tryptophan metabolism
pgd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pgd00401  Novobiocin biosynthesis
pgd00405  Phenazine biosynthesis
pgd00410  beta-Alanine metabolism
pgd00430  Taurine and hypotaurine metabolism
pgd00440  Phosphonate and phosphinate metabolism
pgd00450  Selenocompound metabolism
pgd00460  Cyanoamino acid metabolism
pgd00470  D-Amino acid metabolism
pgd00480  Glutathione metabolism
pgd00500  Starch and sucrose metabolism
pgd00520  Amino sugar and nucleotide sugar metabolism
pgd00521  Streptomycin biosynthesis
pgd00523  Polyketide sugar unit biosynthesis
pgd00525  Acarbose and validamycin biosynthesis
pgd00540  Lipopolysaccharide biosynthesis
pgd00541  O-Antigen nucleotide sugar biosynthesis
pgd00543  Exopolysaccharide biosynthesis
pgd00550  Peptidoglycan biosynthesis
pgd00552  Teichoic acid biosynthesis
pgd00561  Glycerolipid metabolism
pgd00562  Inositol phosphate metabolism
pgd00564  Glycerophospholipid metabolism
pgd00600  Sphingolipid metabolism
pgd00620  Pyruvate metabolism
pgd00623  Toluene degradation
pgd00625  Chloroalkane and chloroalkene degradation
pgd00626  Naphthalene degradation
pgd00627  Aminobenzoate degradation
pgd00630  Glyoxylate and dicarboxylate metabolism
pgd00633  Nitrotoluene degradation
pgd00640  Propanoate metabolism
pgd00643  Styrene degradation
pgd00650  Butanoate metabolism
pgd00660  C5-Branched dibasic acid metabolism
pgd00670  One carbon pool by folate
pgd00680  Methane metabolism
pgd00710  Carbon fixation by Calvin cycle
pgd00720  Other carbon fixation pathways
pgd00730  Thiamine metabolism
pgd00740  Riboflavin metabolism
pgd00750  Vitamin B6 metabolism
pgd00760  Nicotinate and nicotinamide metabolism
pgd00770  Pantothenate and CoA biosynthesis
pgd00780  Biotin metabolism
pgd00785  Lipoic acid metabolism
pgd00790  Folate biosynthesis
pgd00860  Porphyrin metabolism
pgd00900  Terpenoid backbone biosynthesis
pgd00906  Carotenoid biosynthesis
pgd00907  Pinene, camphor and geraniol degradation
pgd00910  Nitrogen metabolism
pgd00920  Sulfur metabolism
pgd00930  Caprolactam degradation
pgd00946  Degradation of flavonoids
pgd00999  Biosynthesis of various plant secondary metabolites
pgd01040  Biosynthesis of unsaturated fatty acids
pgd01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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