KEGG   PATHWAY: php02020
Entry
php02020                    Pathway                                
Name
Two-component system - Phaeobacter porticola
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
php02020  Two-component system
php02020

Other DBs
GO: 0000160
Organism
Phaeobacter porticola [GN:php]
Gene
PhaeoP97_01591  phosphate regulon sensor protein phoR-like protein [KO:K07636] [EC:2.7.13.3]
PhaeoP97_01585  phoB; phosphate regulon transcriptional regulatory protein PhoB [KO:K07657]
PhaeoP97_01590  putative phosphate transporter, phosphate-binding protein [KO:K02040]
PhaeoP97_03493  phosphate ABC transporter substrate-binding protein, PhoT family [KO:K02040]
PhaeoP97_01302  sensor histidine kinase [KO:K07638] [EC:2.7.13.3]
PhaeoP97_03314  petR; protein PetR [KO:K07659]
PhaeoP97_02240  degP; protease do [KO:K04771] [EC:3.4.21.107]
PhaeoP97_03359  putative flagellin [KO:K02406]
PhaeoP97_03379  motA; chemotaxis protein MotA [KO:K02556]
PhaeoP97_02528  signal transduction histidine kinase [KO:K07649] [EC:2.7.13.3]
PhaeoP97_02527  two-component system response regulator [KO:K07774]
PhaeoP97_03812  putative protein in bacteria [KO:K07793]
PhaeoP97_03887  putative integral membrane protein [KO:K07793]
PhaeoP97_02524  putative integral membrane protein [KO:K07793]
PhaeoP97_02525  Tripartite tricarboxylate transporter TctB family protein [KO:K07794]
PhaeoP97_03813  Tripartite tricarboxylate transporter TctB family protein [KO:K07794]
PhaeoP97_03888  Tripartite tricarboxylate transporter TctB family protein [KO:K07794]
PhaeoP97_02526  putative protein in bacteria [KO:K07795]
PhaeoP97_03889  hypothetical protein [KO:K07795]
PhaeoP97_01508  ctaA; heme A synthase CtaA [KO:K02259] [EC:1.17.99.9]
PhaeoP97_00001  dnaA; chromosomal replication initiator protein DnaA [KO:K02313]
PhaeoP97_01373  dltA1; D-alanine--poly(phosphoribitol) ligase subunit [KO:K03367] [EC:6.1.1.13]
PhaeoP97_01375  dltA2; D-alanine--poly(phosphoribitol) ligase subunit [KO:K03367] [EC:6.1.1.13]
PhaeoP97_01336  putative integral membrane protein [KO:K14205] [EC:2.3.2.3]
PhaeoP97_00343  chvG; sensor protein ChvG [KO:K14980] [EC:2.7.13.3]
PhaeoP97_00342  chvI; transcriptional regulatory protein ChvI [KO:K14981]
PhaeoP97_01966  transcriptional regulator, containing response regulator domain [KO:K07684]
PhaeoP97_02021  two-component signal transduction system, response regulator [KO:K07684]
PhaeoP97_04046  two-component system sensor-like protein [KO:K07679] [EC:2.7.13.3]
PhaeoP97_01734  putative fatty acid desaturase [KO:K10255] [EC:1.14.19.23 1.14.19.45]
PhaeoP97_01934  putative fatty acid desaturase [KO:K10255] [EC:1.14.19.23 1.14.19.45]
PhaeoP97_02740  Flp pilus assembly protein CpaB-like protein [KO:K02279]
PhaeoP97_02741  putative bacterial type II/III secretion system protein [KO:K02280]
PhaeoP97_02743  Flp pilus assembly protein, ATPase CpaE [KO:K02282]
PhaeoP97_02744  Flp pilus assembly protein, ATPase CpaF [KO:K02283] [EC:7.4.2.8]
PhaeoP97_02745  type II secretion system protein F-like protein [KO:K12510]
PhaeoP97_02746  type II secretion system protein F-like protein [KO:K12511]
PhaeoP97_02618  UTP--GlnB (protein PII) uridylyltransferase, GlnD [KO:K00990] [EC:2.7.7.59]
PhaeoP97_01907  glnB1; nitrogen regulatory protein P-II [KO:K04751]
PhaeoP97_01475  Signal transduction histidine kinase, nitrogen specific [KO:K07708] [EC:2.7.13.3]
PhaeoP97_01476  ntrC; nitrogen regulation protein NtrC [KO:K07712]
PhaeoP97_02664  putative glutamine synthetase [KO:K01915] [EC:6.3.1.2]
PhaeoP97_01147  puuA1; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
PhaeoP97_01149  puuA2; gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
PhaeoP97_01908  glnA; glutamine synthetase GlnA [KO:K01915] [EC:6.3.1.2]
PhaeoP97_02798  glutamine synthase-like protein [KO:K01915] [EC:6.3.1.2]
PhaeoP97_01477  ntrY; nitrogen regulation protein NtrY [KO:K13598] [EC:2.7.13.3]
PhaeoP97_01478  ntrX; nitrogen assimilation regulatory protein NtrX [KO:K13599]
PhaeoP97_03228  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PhaeoP97_03514  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
PhaeoP97_01200  fadA2; 3-ketoacyl-CoA thiolase FadA [KO:K00626] [EC:2.3.1.9]
PhaeoP97_03016  phaA; acetyl-CoA acetyltransferase PhaA [KO:K00626] [EC:2.3.1.9]
PhaeoP97_02944  fadA1; 3-ketoacyl-CoA thiolase FadA [KO:K00626] [EC:2.3.1.9]
PhaeoP97_01341  dctB1; C4-dicarboxylate transport sensor protein DctB [KO:K10125] [EC:2.7.13.3]
PhaeoP97_02066  dctB2; C4-dicarboxylate transport sensor protein DctB [KO:K10125] [EC:2.7.13.3]
PhaeoP97_02065  dctD2; C4-dicarboxylate transport transcriptional regulatory protein DctD [KO:K10126]
PhaeoP97_03736  methyltransferase, cheR type [KO:K00575] [EC:2.1.1.80]
PhaeoP97_01666  CheR and CheB-like -like protein [KO:K13924] [EC:2.1.1.80 3.1.1.61]
PhaeoP97_01865  putative methyl-accepting chemotaxis protein [KO:K03406]
PhaeoP97_01177  mcpA2; chemoreceptor McpA [KO:K03406]
PhaeoP97_02842  mcpA1; chemoreceptor McpA [KO:K03406]
PhaeoP97_00868  methyl-accepting chemotaxis sensory transducer with Cache sensor [KO:K03406]
PhaeoP97_03588  methyl-accepting chemotaxis protein [KO:K03406]
PhaeoP97_02366  Methyl-accepting chemotaxis protein [KO:K03406]
PhaeoP97_03741  Methyl-accepting chemotaxis protein [KO:K03406]
PhaeoP97_02421  putative methyl-accepting chemotaxis protein [KO:K03406]
PhaeoP97_03737  cheW; putative chemotaxis protein CheW [KO:K03408]
PhaeoP97_03738  cheA; chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
PhaeoP97_03735  response regulator receiver domain-containing protein [KO:K03413]
PhaeoP97_03739  response regulator receiver [KO:K03413]
PhaeoP97_03742  putative chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
PhaeoP97_00818  pleD; response regulator PleD [KO:K02488] [EC:2.7.7.65]
PhaeoP97_01533  two-component system histidine kinase / response regulator [KO:K13587] [EC:2.7.13.3]
PhaeoP97_01563  putative protein in bacteria [KO:K13588]
PhaeoP97_01433  ctrA; cell cycle response regulator [KO:K13584]
PhaeoP97_02064  dctP3; C4-dicarboxylate-binding periplasmic protein DctP [KO:K11688]
PhaeoP97_02063  dctQ4; TRAP transporter, subunit DctQ [KO:K11689]
PhaeoP97_02062  dctM5; TRAP transporter, subunit DctM [KO:K11690]
PhaeoP97_01295  dctM2; TRAP transporter, subunit DctM [KO:K11690]
PhaeoP97_00059  dctM7; TRAP transporter, subunit DctM [KO:K11690]
PhaeoP97_02239  putative transcriptional regulator, crp family [KO:K10914]
PhaeoP97_00922  glsA; glutaminase A [KO:K01425] [EC:3.5.1.2]
PhaeoP97_03409  regB; sensor histidine kinase RegB [KO:K15011] [EC:2.7.13.3]
PhaeoP97_03407  regA; photosynthetic apparatus regulatory protein RegA [KO:K15012]
PhaeoP97_03299  petA; ubiquinol-cytochrome c reductase iron-sulfur subunit [KO:K00411] [EC:7.1.1.8]
PhaeoP97_03298  petB; cytochrome b [KO:K00412]
PhaeoP97_03297  petC; cytochrome c1 [KO:K00413]
PhaeoP97_00488  cycM; cytochrome c-552 [KO:K08738]
PhaeoP97_00030  Cytochrome c2 [KO:K08738]
PhaeoP97_00082  cytochrome c [KO:K08738]
PhaeoP97_00749  cytochrome c-like protein [KO:K08738]
PhaeoP97_00495  cytochrome c oxidase, cbb3-type, subunit I [KO:K00404] [EC:7.1.1.9]
PhaeoP97_00042  fixN; cytochrome c oxidase subunit 1 [KO:K00404] [EC:7.1.1.9]
PhaeoP97_00496  ccoO; cytochrome c oxidase subunit 2 [KO:K00405]
PhaeoP97_00041  putative cytochrome C oxidase, monohem subunit / FixO [KO:K00405]
PhaeoP97_00497  cccQ; cytochrome c oxidase subunit 4 [KO:K00407]
PhaeoP97_00040  Cbb3-type cytochrome oxidase, subunit 3 [KO:K00407]
PhaeoP97_00498  ccoP; cytochrome c oxidase subunit 3 [KO:K00406]
PhaeoP97_00039  putative cytochrome c oxidase cbb3-type, subunit III [KO:K00406]
PhaeoP97_01969  cydA; cytochrome d ubiquinol oxidase subunit 1 [KO:K00425] [EC:7.1.1.7]
PhaeoP97_01968  cydB; cytochrome d ubiquinol oxidase subunit 2 [KO:K00426] [EC:7.1.1.7]
PhaeoP97_02274  putative outer membrane efflux protein [KO:K12340]
PhaeoP97_00854  putative capsule polysaccharide export outer membrane protein [KO:K01991]
PhaeoP97_03611  Periplasmic protein involved in polysaccharide export [KO:K01991]
PhaeoP97_04017  putative polysaccharide biosynthesis/export protein [KO:K01991]
PhaeoP97_02285  protein-tyrosine phosphatase [KO:K25307] [EC:3.1.3.48]
PhaeoP97_01964  two-component system hybrid kinase [KO:K20974] [EC:2.7.13.3]
PhaeoP97_02203  signal transduction histidine kinase [KO:K20975] [EC:2.7.13.3]
PhaeoP97_03458  putative histidine-containing phosphotransfer protein [KO:K20976]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
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Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
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J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
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  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
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Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
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  Title
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Reference
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J Bacteriol 182:961-6 (2000)
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Reference
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  Title
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.
  Journal
Proc Natl Acad Sci U S A 101:13318-23 (2004)
DOI:10.1073/pnas.0403064101
Reference
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Reference
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  Title
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  Journal
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Reference
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  Title
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Reference
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A VicRK signal transduction system in Streptococcus mutans affects gtfBCD, gbpB, and ftf expression, biofilm formation, and genetic competence development.
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J Bacteriol 187:4064-76 (2005)
DOI:10.1128/JB.187.12.4064-4076.2005
Reference
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Identification and characterization of a regulatory sequence recognized by Mycobacterium tuberculosis persistence regulator MprA.
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J Bacteriol 187:202-12 (2005)
DOI:10.1128/JB.187.1.202-212.2005
Reference
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  Title
Unusual two-component signal transduction pathways in the actinobacteria.
  Journal
Adv Appl Microbiol 61:1-26 (2007)
DOI:10.1016/S0065-2164(06)61001-0
Reference
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  Title
Osmosensing and osmosignaling in Corynebacterium glutamicum.
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Reference
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  Title
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Reference
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Reference
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  Title
The sensor kinase CitA (DpiB) of Escherichia coli functions as a high-affinity citrate receptor.
  Journal
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DOI:10.1007/s00203-001-0393-z
Reference
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Function of DcuS from Escherichia coli as a fumarate-stimulated histidine protein kinase in vitro.
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J Biol Chem 277:39809-14 (2002)
DOI:10.1074/jbc.M204482200
Reference
PMID:8550490
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Identification and molecular characterization of a putative regulatory locus that affects autolysis in Staphylococcus aureus.
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Reference
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  Title
Analysis of genetic elements controlling Staphylococcus aureus lrgAB expression: potential role of DNA topology in SarA regulation.
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Reference
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  Title
High genetic variability of the agr locus in Staphylococcus species.
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Reference
PMID:8501030
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  Title
Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12.
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Reference
PMID:9220011
  Authors
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  Title
'Locked-on' and 'locked-off' signal transduction mutations in the periplasmic domain of the Escherichia coli NarQ and NarX sensors affect nitrate- and nitrite-dependent regulation by NarL and NarP.
  Journal
Mol Microbiol 24:1049-60 (1997)
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Reference
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  Title
Cooperativity in signal transfer through the Uhp system of Escherichia coli.
  Journal
J Bacteriol 184:4205-10 (2002)
DOI:10.1128/JB.184.15.4205-4210.2002
Reference
  Authors
Hagiwara D, Sugiura M, Oshima T, Mori H, Aiba H, Yamashino T, Mizuno T.
  Title
Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli.
  Journal
J Bacteriol 185:5735-46 (2003)
DOI:10.1128/JB.185.19.5735-5746.2003
Reference
  Authors
Hirakawa H, Nishino K, Yamada J, Hirata T, Yamaguchi A.
  Title
Beta-lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli.
  Journal
J Antimicrob Chemother 52:576-82 (2003)
DOI:10.1093/jac/dkg406
Reference
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Suzuki K, Wang X, Weilbacher T, Pernestig AK, Melefors O, Georgellis D, Babitzke P, Romeo T.
  Title
Regulatory circuitry of the CsrA/CsrB and BarA/UvrY systems of Escherichia coli.
  Journal
J Bacteriol 184:5130-40 (2002)
DOI:10.1128/JB.184.18.5130-5140.2002
Reference
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Kato A, Ohnishi H, Yamamoto K, Furuta E, Tanabe H, Utsumi R.
  Title
Transcription of emrKY is regulated by the EvgA-EvgS two-component system in Escherichia coli K-12.
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Biosci Biotechnol Biochem 64:1203-9 (2000)
DOI:10.1271/bbb.64.1203
Reference
  Authors
Ansaldi M, Dubnau D.
  Title
Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone.
  Journal
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Related
pathway
php00190  Oxidative phosphorylation
php00550  Peptidoglycan biosynthesis
php00910  Nitrogen metabolism
php02030  Bacterial chemotaxis
php02040  Flagellar assembly
php03070  Bacterial secretion system
KO pathway
ko02020   
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