PATHWAY: pin02010 Help
Entry
Name
ABC transporters - Psychromonas ingrahamii
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Psychromonas ingrahamii [GN:
pin ]
Gene
Ping_0049 ABC taurine transporter, binding protein inner membrane component [KO:K15552 ]
Ping_2376 ABC transporter substrate binding inner membrane protein [KO:K15599 ]
Ping_2166 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
Ping_0976 modF; ABC transporter for molybdenum ATP-binding protein ModF [KO:K05776 ]
Ping_2746 ABC transporter periplasmic substrate-binding protein [KO:K02012 ]
Ping_3007 ABC iron(III) transporter periplasmic binding protein [KO:K02012 ]
Ping_3006 iron(III) ABC transporter, inner membrane binding component [KO:K02011 ]
Ping_2744 ABC transporter binding protein inner membrane protein [KO:K02011 ]
Ping_0385 thiamine ABC transporter, periplasmic binding protein [KO:K02064 ]
Ping_1238 Spermidine/putrescine-binding periplasmic protein-like protein [KO:K11069 ]
Ping_2073 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Ping_0614 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Ping_3427 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Ping_2074 ABC transporter substrate binding inner membrane protein [KO:K02001 ]
Ping_3425 ABC transporter substrate binding inner membrane protein [KO:K02001 ]
Ping_0615 glycine betaine ABC transporter, binding protein inner membrane component [KO:K02001 ]
Ping_2011 carbohydrate ABC transporter ATP-binding protein, CUT1 family [KO:K10111 ] [EC:7.5.2.-]
Ping_2512 carbohydrate ABC transporter ATP-binding protein, CUT1 family [KO:K10111 ] [EC:7.5.2.-]
Ping_1959 carbohydrate ABC transporter ATP-binding protein, CUT1 family [KO:K10112 ] [EC:7.5.2.-]
Ping_2910 trehalose-binding protein / maltose-binding protein / sucrose-binding protein [KO:K10232 ]
Ping_2911 sucrose ABC transporter membrane protein / trehalose ABC transporter membrane protein / maltose ABC transporter membrane protein [KO:K10233 ]
Ping_2912 trehalose ABC transporter membrane protein / sucrose ABC transporter membrane protein / maltose ABC transporter membrane protein [KO:K10234 ]
Ping_2913 sucrose ABC transporter ATP-binding protein / trehalose ABC transporter ATP-binding protein / maltose ABC transporter ATP-binding protein [KO:K10235 ]
Ping_1956 carbohydrate ABC transporter substrate-binding protein, CUT1 family [KO:K17315 ]
Ping_2284 carbohydrate ABC transporter substrate-binding protein, CUT1 family [KO:K17315 ]
Ping_1957 carbohydrate ABC transporter membrane protein 1, CUT1 family [KO:K17316 ]
Ping_1958 carbohydrate ABC transporter membrane protein 2, CUT1 family [KO:K17317 ]
Ping_1312 monosaccharide ABC transporter substrate-binding protein, CUT2 family [KO:K10439 ]
Ping_1110 monosaccharide ABC transporter substrate-binding protein, CUT2 family [KO:K10439 ]
Ping_2806 monosaccharide ABC transporter substrate-binding protein, CUT2 family [KO:K10439 ]
Ping_2804 monosaccharide ABC transporter substrate-binding protein, CUT2 family [KO:K10439 ]
Ping_2790 monosaccharide ABC transporter substrate-binding protein, CUT2 family [KO:K10439 ]
Ping_2789 monosaccharide ABC transporter membrane protein, CUT2 family [KO:K10440 ]
Ping_2788 monosaccharide ABC transporter membrane protein, CUT2 family [KO:K10440 ]
Ping_3169 carbohydrate ABC transporter substrate-binding protein, CUT1 family [KO:K17321 ]
Ping_3172 carbohydrate ABC transporter membrane protein 1, CUT1 family [KO:K17322 ]
Ping_3171 carbohydrate ABC transporter membrane protein 2, CUT1 family [KO:K17323 ]
Ping_3174 carbohydrate ABC transporter ATP-binding protein, CUT1 family [KO:K17324 ]
Ping_3173 carbohydrate ABC transporter ATP-binding protein, CUT1 family [KO:K17325 ]
Ping_2093 carbohydrate ABC transporter substrate-binding protein, CUT1 family [KO:K05813 ]
Ping_2094 carbohydrate ABC transporter membrane protein 1, CUT1 family [KO:K05814 ]
Ping_2095 carbohydrate ABC transporter membrane protein 2, CUT1 family [KO:K05815 ]
Ping_2588 phosphate ABC transporter substrate-binding protein, PhoT family [KO:K02040 ]
Ping_2409 phosphate ABC transporter substrate-binding protein, PhoT family [KO:K02040 ]
Ping_2587 phosphate ABC transporter substrate-binding protein, PhoT family [KO:K02040 ]
Ping_2408 phosphate ABC transporter membrane protein 1, PhoT family [KO:K02037 ]
Ping_2589 pstC; phosphate ABC transporter membrane protein 1, PhoT family [KO:K02037 ]
Ping_2407 phosphate ABC transporter membrane protein 2, PhoT family [KO:K02038 ]
Ping_2590 pstA; phosphate ABC transporter membrane protein 2, PhoT family [KO:K02038 ]
Ping_1770 ABC phosphonate transporter periplasmic phosphonate-binding protein [KO:K02044 ]
Ping_3695 ABC phosphonate transporter periplasmic phosphonate-binding protein [KO:K02044 ]
Ping_1768 ABC transporter complex for phosphonate inner membrane binding subunit [KO:K02042 ]
Ping_0296 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K09997 ]
Ping_2818 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K09969 ]
Ping_2822 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K09969 ]
Ping_2819 amino acid ABC transporter membrane protein 1, PAAT family [KO:K09970 ]
Ping_2823 amino acid ABC transporter membrane protein 1, PAAT family [KO:K09970 ]
Ping_2820 amino acid ABC transporter membrane protein 2, PAAT family [KO:K09971 ]
Ping_2824 amino acid ABC transporter membrane protein 2, PAAT family [KO:K09971 ]
Ping_1920 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K16961 ]
Ping_1919 amino acid ABC transporter membrane protein, PAAT family [KO:K16962 ]
Ping_1918 amino acid ABC transporter ATP-binding protein, PAAT family [KO:K16963 ]
Ping_2833 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K10022 ]
Ping_2831 amino acid ABC transporter membrane protein 2, PAAT family [KO:K10023 ]
Ping_2832 amino acid ABC transporter membrane protein 1, PAAT family [KO:K10024 ]
Ping_1517 amino acid ABC transporter substrate-binding protein, PAAT family [KO:K23061 ]
Ping_1516 amino acid ABC transporter membrane protein 1, PAAT family [KO:K23062 ]
Ping_1515 amino acid ABC transporter membrane protein 2, PAAT family [KO:K23063 ]
Ping_3537 ABC transporter substrate binding inner membrane protein [KO:K02072 ]
Ping_2986 amino acid/amide ABC transporter substrate-binding protein, HAAT family [KO:K11959 ]
Ping_2987 amino acid/amide ABC transporter membrane protein 1, HAAT family [KO:K11960 ]
Ping_2988 amino acid/amide ABC transporter membrane protein 2, HAAT family [KO:K11961 ]
Ping_2990 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [KO:K11963 ]
Ping_2192 ABC dipeptide transporter extracellular solute-binding protein, family 5 [KO:K19226 ]
Ping_2193 peptide ABC transporter, protein inner membrane binding component [KO:K19227 ]
Ping_2194 sapC; peptide ABC transporter, protein inner membrane binding component SapC [KO:K19228 ]
Ping_2195 ABC oligopeptide/dipeptide transporter ATP-binding protein [KO:K19229 ]
Ping_2196 ABC transporter ATP-binding protein predicted for antimicrobial peptide [KO:K19230 ]
Ping_0289 ABC transporter extracellular solute-binding protein, family 5 [KO:K13893 ]
Ping_0290 ABC transporter substrate binding inner membrane protein [KO:K13894 ]
Ping_0291 ABC transporter binding protein inner membrane protein [KO:K13895 ]
Ping_0292 ABC transporter foroligopeptide/dipeptide ATP-binding protein [KO:K13896 ]
Ping_2201 lipoprotein releasing system, transmembrane protein, LolC/E family protein [KO:K09808 ]
Ping_2203 lipoprotein releasing system, transmembrane protein, LolC/E family protein [KO:K09808 ]
Ping_2202 lipoprotein releasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
Ping_2331 ABC-type multidrug/protein/lipid transport system ATP-binding protein [KO:K18889 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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