KEGG   PATHWAY: pory03440
Entry
pory03440                   Pathway                                
Name
Homologous recombination - Pseudomonas oryziphila
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pory03440  Homologous recombination
pory03440

Other DBs
GO: 0000724
Organism
Pseudomonas oryziphila [GN:pory]
Gene
EJA05_22190  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
EJA05_17580  single-stranded DNA-binding protein [KO:K03111]
EJA05_21165  single-stranded DNA-binding protein [KO:K03111]
EJA05_02700  ssb; single-stranded DNA-binding protein [KO:K03111]
EJA05_00015  recF; DNA replication/repair protein RecF [KO:K03629]
EJA05_05660  recO; DNA repair protein RecO [KO:K03584]
EJA05_19695  recR; recombination protein RecR [KO:K06187]
EJA05_21760  recA; recombinase RecA [KO:K03553]
EJA05_00405  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
EJA05_21590  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
EJA05_21585  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
EJA05_21595  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
EJA05_27630  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
EJA05_24720  recB; exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
EJA05_24725  recC; exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
EJA05_24715  recD; exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
EJA05_21970  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
EJA05_00010  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
EJA05_19705  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
EJA05_03365  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
EJA05_08165  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
EJA05_19140  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
EJA05_01915  3'-5' exonuclease [KO:K02342] [EC:2.7.7.7]
EJA05_22645  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
EJA05_26560  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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