PATHWAY: ppii01100 Help Entry ppii01100                   Pathway                                 Name Metabolic pathways - Pseudomonas piscis Class BRITE hierarchy Pathway map ppii01100   Metabolic pathways Module ppii_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ppii01100] ppii_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ppii01100] ppii_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ppii01100] ppii_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ppii01100] ppii_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ppii01100] ppii_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ppii01100] ppii_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ppii01100] ppii_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ppii01100] ppii_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ppii01100] ppii_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ppii01100] ppii_M00015   Proline biosynthesis, glutamate => proline [PATH:ppii01100] ppii_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ppii01100] ppii_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ppii01100] ppii_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ppii01100] ppii_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ppii01100] ppii_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ppii01100] ppii_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ppii01100] ppii_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ppii01100] ppii_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ppii01100] ppii_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ppii01100] ppii_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ppii01100] ppii_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ppii01100] ppii_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ppii01100] ppii_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:ppii01100] ppii_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ppii01100] ppii_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ppii01100] ppii_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ppii01100] ppii_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ppii01100] ppii_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ppii01100] ppii_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ppii01100] ppii_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ppii01100] ppii_M00063   CMP-KDO biosynthesis [PATH:ppii01100] ppii_M00082   Fatty acid biosynthesis, initiation [PATH:ppii01100] ppii_M00083   Fatty acid biosynthesis, elongation [PATH:ppii01100] ppii_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ppii01100] ppii_M00087   beta-Oxidation [PATH:ppii01100] ppii_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ppii01100] ppii_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ppii01100] ppii_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppii01100] ppii_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppii01100] ppii_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ppii01100] ppii_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ppii01100] ppii_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppii01100] ppii_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppii01100] ppii_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppii01100] ppii_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppii01100] ppii_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppii01100] ppii_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppii01100] ppii_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppii01100] ppii_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:ppii01100] ppii_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ppii01100] ppii_M00149   Succinate dehydrogenase, prokaryotes [PATH:ppii01100] ppii_M00151   Cytochrome bc1 complex respiratory unit [PATH:ppii01100] ppii_M00155   Cytochrome c oxidase, prokaryotes [PATH:ppii01100] ppii_M00156   Cytochrome c oxidase, cbb3-type [PATH:ppii01100] ppii_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ppii01100] ppii_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ppii01100] ppii_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppii01100] ppii_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ppii01100] ppii_M00417   Cytochrome o ubiquinol oxidase [PATH:ppii01100] ppii_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ppii01100] ppii_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ppii01100] ppii_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ppii01100] ppii_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:ppii01100] ppii_M00555   Betaine biosynthesis, choline => betaine [PATH:ppii01100] ppii_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ppii01100] ppii_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ppii01100] ppii_M00621   Glycine cleavage system [PATH:ppii01100] ppii_M00637   Anthranilate degradation, anthranilate => catechol [PATH:ppii01100] ppii_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ppii01100] ppii_M00790   Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:ppii01100] ppii_M00793   dTDP-L-rhamnose biosynthesis [PATH:ppii01100] ppii_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ppii01100] ppii_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppii01100] ppii_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:ppii01100] ppii_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppii01100] ppii_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppii01100] ppii_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ppii01100] ppii_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ppii01100] ppii_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:ppii01100] ppii_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ppii01100] ppii_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ppii01100] ppii_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ppii01100] ppii_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ppii01100] ppii_M00970   Proline degradation, proline => glutamate [PATH:ppii01100] ppii_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:ppii01100] Organism Pseudomonas piscis [GN:ppii] Related pathway ppii00010   Glycolysis / Gluconeogenesis ppii00020   Citrate cycle (TCA cycle) ppii00030   Pentose phosphate pathway ppii00040   Pentose and glucuronate interconversions ppii00051   Fructose and mannose metabolism ppii00052   Galactose metabolism ppii00053   Ascorbate and aldarate metabolism ppii00061   Fatty acid biosynthesis ppii00071   Fatty acid degradation ppii00130   Ubiquinone and other terpenoid-quinone biosynthesis ppii00190   Oxidative phosphorylation ppii00220   Arginine biosynthesis ppii00230   Purine metabolism ppii00240   Pyrimidine metabolism ppii00250   Alanine, aspartate and glutamate metabolism ppii00260   Glycine, serine and threonine metabolism ppii00261   Monobactam biosynthesis ppii00270   Cysteine and methionine metabolism ppii00280   Valine, leucine and isoleucine degradation ppii00290   Valine, leucine and isoleucine biosynthesis ppii00300   Lysine biosynthesis ppii00310   Lysine degradation ppii00330   Arginine and proline metabolism ppii00332   Carbapenem biosynthesis ppii00340   Histidine metabolism ppii00350   Tyrosine metabolism ppii00360   Phenylalanine metabolism ppii00361   Chlorocyclohexane and chlorobenzene degradation ppii00362   Benzoate degradation ppii00364   Fluorobenzoate degradation ppii00380   Tryptophan metabolism ppii00400   Phenylalanine, tyrosine and tryptophan biosynthesis ppii00401   Novobiocin biosynthesis ppii00404   Staurosporine biosynthesis ppii00405   Phenazine biosynthesis ppii00410   beta-Alanine metabolism ppii00430   Taurine and hypotaurine metabolism ppii00440   Phosphonate and phosphinate metabolism ppii00450   Selenocompound metabolism ppii00460   Cyanoamino acid metabolism ppii00470   D-Amino acid metabolism ppii00480   Glutathione metabolism ppii00500   Starch and sucrose metabolism ppii00520   Amino sugar and nucleotide sugar metabolism ppii00521   Streptomycin biosynthesis ppii00523   Polyketide sugar unit biosynthesis ppii00525   Acarbose and validamycin biosynthesis ppii00540   Lipopolysaccharide biosynthesis ppii00541   O-Antigen nucleotide sugar biosynthesis ppii00543   Exopolysaccharide biosynthesis ppii00550   Peptidoglycan biosynthesis ppii00552   Teichoic acid biosynthesis ppii00561   Glycerolipid metabolism ppii00562   Inositol phosphate metabolism ppii00564   Glycerophospholipid metabolism ppii00565   Ether lipid metabolism ppii00592   alpha-Linolenic acid metabolism ppii00600   Sphingolipid metabolism ppii00620   Pyruvate metabolism ppii00621   Dioxin degradation ppii00622   Xylene degradation ppii00623   Toluene degradation ppii00625   Chloroalkane and chloroalkene degradation ppii00626   Naphthalene degradation ppii00627   Aminobenzoate degradation ppii00630   Glyoxylate and dicarboxylate metabolism ppii00640   Propanoate metabolism ppii00643   Styrene degradation ppii00650   Butanoate metabolism ppii00660   C5-Branched dibasic acid metabolism ppii00670   One carbon pool by folate ppii00680   Methane metabolism ppii00730   Thiamine metabolism ppii00740   Riboflavin metabolism ppii00750   Vitamin B6 metabolism ppii00760   Nicotinate and nicotinamide metabolism ppii00770   Pantothenate and CoA biosynthesis ppii00780   Biotin metabolism ppii00785   Lipoic acid metabolism ppii00790   Folate biosynthesis ppii00791   Atrazine degradation ppii00860   Porphyrin metabolism ppii00900   Terpenoid backbone biosynthesis ppii00907   Pinene, camphor and geraniol degradation ppii00910   Nitrogen metabolism ppii00920   Sulfur metabolism ppii00930   Caprolactam degradation ppii00946   Degradation of flavonoids ppii00999   Biosynthesis of various plant secondary metabolites ppii01040   Biosynthesis of unsaturated fatty acids ppii01055   Biosynthesis of vancomycin group antibiotics ppii01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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