Entry
Name
ABC transporters - Paenibacillus riograndensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Paenibacillus riograndensis [GN:
pri ]
Gene
PRIO_1499 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163 ]
PRIO_3904 binding-protein-dependent transport system inner membrane protein [KO:K15554 ]
PRIO_3057 binding-protein-dependent transport system inner membrane protein [KO:K15599 ]
PRIO_1209 yvgL; putative ABC transporter substrate-binding lipoprotein YvgL [KO:K02020 ]
PRIO_6463 spermidine/putrescine import ABC transporter spermidine/putrescine-binding protein potd [KO:K11069 ]
PRIO_5713 ABC transporter, substrate-binding protein, QAT family [KO:K02002 ]
PRIO_5714 opuAB; glycine betaine transport system permease protein opuAB [KO:K02001 ]
PRIO_3202 glycine/betaine ABC transporter substrate-binding protein [KO:K05845 ]
PRIO_3201 opuCB; Glycine betaine/carnitine/choline transport system permease protein OpuCB [KO:K05846 ]
PRIO_3200 opuCA; Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA [KO:K05847 ] [EC:7.6.2.9 ]
PRIO_0147 msmX; Maltodextrin import ATP-binding protein MsmX [KO:K10112 ] [EC:7.5.2.-]
PRIO_5901 binding-protein-dependent transport system inner membrane protein [KO:K15771 ]
PRIO_2162 binding-protein-dependent transport systems inner membrane component [KO:K15771 ]
PRIO_5900 ganQ3; putative arabinogalactan oligomer transport system permease protein GanQ [KO:K15772 ]
PRIO_2163 ganQ1; putative arabinogalactan oligomer transport system permease protein GanQ [KO:K15772 ]
PRIO_0400 binding-protein-dependent transporters inner membrane component [KO:K10118 ]
PRIO_1779 binding-protein-dependent transport system inner membrane protein [KO:K10118 ]
PRIO_2287 binding-protein-dependent transport system inner membrane protein [KO:K10118 ]
PRIO_1919 binding-protein-dependent transport systems inner membrane component [KO:K10118 ]
PRIO_1981 Potential starch degradation products transporter permease amyD [KO:K10118 ]
PRIO_1330 binding-protein-dependent transport system inner membrane protein [KO:K10118 ]
PRIO_1342 binding-protein-dependent transport system inner membrane component [KO:K10118 ]
PRIO_3679 binding-protein-dependent transport system inner membrane component [KO:K10118 ]
PRIO_6725 binding-protein-dependent transport systems inner membrane component [KO:K10118 ]
PRIO_2023 binding-protein-dependent transport systems inner membrane component [KO:K10118 ]
PRIO_1044 binding-protein-dependent transport system inner membrane component [KO:K10118 ]
PRIO_0401 binding-protein-dependent transporters inner membrane component [KO:K10119 ]
PRIO_2286 binding-protein-dependent transport system inner membrane component [KO:K10119 ]
PRIO_4912 binding-protein-dependent transport systems inner membrane component [KO:K10119 ]
PRIO_4715 binding-protein-dependent transport systems inner membrane component [KO:K10119 ]
PRIO_1982 putative starch degradation products transporter permease amyC [KO:K10119 ]
PRIO_3678 binding-protein-dependent transport system inner membrane component [KO:K10119 ]
PRIO_2024 binding-protein-dependent transport systems inner membrane component [KO:K10119 ]
PRIO_2013 binding-protein-dependent transport system inner membrane component [KO:K10119 ]
PRIO_1043 binding-protein-dependent transport system inner membrane component [KO:K10119 ]
PRIO_1912 binding-protein-dependent transport systems inner membrane component [KO:K10119 ]
PRIO_6487 binding-protein-dependent transport system inner membrane component [KO:K10233 ]
PRIO_6486 binding-protein-dependent transport system inner membrane component [KO:K10234 ]
PRIO_3349 binding-protein-dependent transport systems inner membrane component [KO:K17319 ]
PRIO_4230 yteP7; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_1675 yteP1; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_1707 binding-protein-dependent transport systems inner membrane component [KO:K17319 ]
PRIO_2592 yteP5; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_2601 binding-protein-dependent transport systems inner membrane component [KO:K17319 ]
PRIO_4361 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_2282 binding-protein-dependent transport system inner membrane component [KO:K17319 ]
PRIO_2306 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_1005 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_5326 CUT1 family carbohydrate ABC transporter membrane protein 1 [KO:K17319 ]
PRIO_5429 yteP11; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_0365 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_4810 binding-protein-dependent transport system inner membrane component [KO:K17319 ]
PRIO_4819 binding-protein-dependent transport systems inner membrane component [KO:K17319 ]
PRIO_4847 yteP9; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_2634 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_3283 CUT1 family carbohydrate ABC transporter membrane protein 1 [KO:K17319 ]
PRIO_4974 binding-protein-dependent transport system inner membrane protein [KO:K17319 ]
PRIO_5929 binding-protein-dependent transport system inner membrane component [KO:K17319 ]
PRIO_5973 yteP15; putative multiple-sugar transport system permease YteP [KO:K17319 ]
PRIO_4861 binding-protein-dependent transport system inner membrane component [KO:K17319 ]
PRIO_5042 binding-protein-dependent transport system inner membrane component [KO:K17319 ]
PRIO_3350 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_4229 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_1676 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_1708 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_1793 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_2283 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_2305 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_1006 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_5428 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_0366 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_4818 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_4846 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_0263 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_0268 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_4973 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_5928 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_2252 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_4862 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_0577 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_3319 binding-protein-dependent transport system inner membrane protein [KO:K17320 ]
PRIO_5041 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_1688 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_4809 binding-protein-dependent transport system inner membrane component [KO:K17320 ]
PRIO_5972 binding-protein-dependent transport systems inner membrane component [KO:K17320 ]
PRIO_3020 binding-protein-dependent transport systems inner membrane component [KO:K10241 ]
PRIO_6014 binding-protein-dependent transport system inner membrane component [KO:K10241 ]
PRIO_3021 binding-protein-dependent transport systems inner membrane component [KO:K10242 ]
PRIO_6013 binding-protein-dependent transport system inner membrane component [KO:K10242 ]
PRIO_4831 araP; L-arabinose transport system permease protein AraP [KO:K17235 ]
PRIO_4830 araQ; L-arabinose transport system permease protein AraQ [KO:K17236 ]
PRIO_2974 chvE; Multiple sugar-binding periplasmic receptor ChvE [KO:K10546 ]
PRIO_2975 araG; L-arabinose transport ATP-binding protein AraG [KO:K10548 ] [EC:7.5.2.-]
PRIO_5804 yufO3; putative ABC transporter ATP-binding protein YufO [KO:K23537 ]
PRIO_1581 yufO1; putative ABC transporter ATP-binding protein YufO [KO:K23537 ]
PRIO_4401 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
PRIO_5030 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
PRIO_5026 ytfQ; ABC transporter periplasmic-binding protein YtfQ [KO:K23508 ]
PRIO_5022 periplasmic binding protein/LacI transcriptional regulator [KO:K23508 ]
PRIO_4400 periplasmic binding protein/LacI transcriptional regulator [KO:K10540 ]
PRIO_4398 mglC; Galactoside transport system permease protein MglC [KO:K10541 ]
PRIO_2084 glycerol-3-phosphate ABC transporter substrate-binding protein [KO:K05813 ]
PRIO_5483 phosphate ABC transporter, inner membrane subunit PstC [KO:K02037 ]
PRIO_0463 glutamine ABC transporter periplasmic-binding protein [KO:K10036 ]
PRIO_0808 glnM; putative glutamine ABC transporter permease protein GlnM [KO:K10040 ]
PRIO_0809 glnP; putative glutamine ABC transporter permease protein GlnP [KO:K10040 ]
PRIO_3062 tcyB; L-cystine transport system permease protein TcyB [KO:K10009 ]
PRIO_1649 polar amino acid ABC transporter, inner membrane subunit [KO:K16958 ]
PRIO_1431 livG; High-affinity branched-chain amino acid transport ATP-binding protein LivG [KO:K01995 ]
PRIO_1432 braG; High-affinity branched-chain amino acid transport ATP-binding protein BraG [KO:K01996 ]
PRIO_6427 ABC-type metal ion transport system, periplasmic component/surface antigen [KO:K02073 ]
PRIO_5652 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
PRIO_1506 binding-protein-dependent transport system inner membrane protein [KO:K02072 ]
PRIO_6428 binding-protein-dependent transporters inner membrane component [KO:K02072 ]
PRIO_1505 metN1-1; Methionine import ATP-binding protein MetN 1 [KO:K02071 ]
PRIO_4192 metN1-2; Methionine import ATP-binding protein MetN 1 [KO:K02071 ]
PRIO_5144 oppB; Oligopeptide transport system permease protein OppB [KO:K15581 ]
PRIO_5143 oppC; Oligopeptide transport system permease protein OppC [KO:K15582 ]
PRIO_3075 oppD1; Oligopeptide transport ATP-binding protein OppD [KO:K15583 ]
PRIO_5142 oppD3; Oligopeptide transport ATP-binding protein OppD [KO:K15583 ]
PRIO_5141 oppF; Oligopeptide transport ATP-binding protein OppF [KO:K10823 ]
PRIO_2499 adcB; putative zinc transport system permease protein AdcB [KO:K09816 ]
PRIO_4951 ecfA; Energy-coupling factor transporter ATP-binding protein EcfA [KO:K16786 ] [EC:7.-.-.-]
PRIO_0615 ecfA2-1; Energy-coupling factor transporter ATP-binding protein EcfA 2 [KO:K16786 ] [EC:7.-.-.-]
PRIO_0616 ecfA2-2; Energy-coupling factor transporter ATP-binding protein EcfA 2 [KO:K16787 ] [EC:7.-.-.-]
PRIO_3312 hrtA; putative hemin import ATP-binding protein HrtA [KO:K09814 ] [EC:7.6.2.-]
PRIO_2427 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family [KO:K20491 ]
PRIO_2426 srtF3; Lantibiotic transport ATP-binding protein SrtF [KO:K20490 ]
PRIO_0854 srtF1; Lantibiotic transport ATP-binding protein SrtF [KO:K20490 ]
PRIO_3885 yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI [KO:K18889 ]
PRIO_2199 yknU1; putative ABC transporter ATP-binding protein YknU [KO:K18889 ]
PRIO_3886 yheH; putative multidrug resistance ABC transporter ATP-binding/permease protein YheH [KO:K18890 ]
PRIO_2200 yknV; putative ABC transporter ATP-binding protein YknV [KO:K18890 ]
PRIO_6359 bmrA; Multidrug resistance ABC transporter ATP-binding/permease protein BmrA [KO:K18104 ] [EC:7.6.2.2 ]
PRIO_4651 yfiB1; putative ABC transporter ATP-binding protein YfiB [KO:K18887 ]
PRIO_4650 yfiC; putative ABC transporter ATP-binding protein YfiC [KO:K18888 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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