KEGG   PATHWAY: rbz02010
Entry
rbz02010                    Pathway                                
Name
ABC transporters - Aestuarium zhoushanense
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
rbz02010  ABC transporters
rbz02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Aestuarium zhoushanense [GN:rbz]
Gene
B9057_09960  nitrate ABC transporter substrate-binding protein [KO:K15576]
B9057_09955  nitrate ABC transporter permease [KO:K15577]
B9057_09950  nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein [KO:K15578] [EC:7.3.2.4]
B9057_10700  molybdate ABC transporter substrate-binding protein [KO:K02020]
B9057_04355  molybdate ABC transporter permease [KO:K02018]
B9057_04350  molybdenum ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
B9057_08410  iron ABC transporter substrate-binding protein [KO:K02012]
B9057_10465  iron-binding protein [KO:K02012]
B9057_10045  iron ABC transporter permease [KO:K02011]
B9057_08705  Fe3+/spermidine/putrescine ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
B9057_13260  thiamine ABC transporter substrate binding subunit [KO:K02064]
B9057_13255  thiamine/thiamine pyrophosphate ABC transporter permease ThiP [KO:K02063]
B9057_13250  thiamine ABC transporter ATP-binding protein [KO:K02062] [EC:7.6.2.15]
B9057_07535  ABC transporter substrate-binding protein [KO:K11069]
B9057_07540  spermidine/putrescine ABC transporter permease PotC [KO:K11070]
B9057_07545  ABC transporter permease [KO:K11071]
B9057_07550  spermidine/putrescine ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
B9057_04485  spermidine/putrescine ABC transporter substrate-binding protein PotF [KO:K11073]
B9057_04470  putrescine ABC transporter permease PotI [KO:K11074]
B9057_04475  putrescine/spermidine ABC transporter permease [KO:K11075]
B9057_04480  polyamine ABC transporter ATP-binding protein [KO:K11076] [EC:7.6.2.16]
B9057_12230  ABC transporter substrate-binding protein [KO:K02002]
B9057_04900  glycine/betaine ABC transporter substrate-binding protein [KO:K02002]
B9057_12225  ABC transporter permease [KO:K02001]
B9057_04895  choline ABC transporter permease subunit [KO:K02001]
B9057_12220  glycine/betaine ABC transporter [KO:K02000] [EC:7.6.2.9]
B9057_04890  choline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
B9057_03075  ABC transporter ATP-binding protein [KO:K10111] [EC:7.5.2.-]
B9057_12155  sugar ABC transporter ATP-binding protein [KO:K10111] [EC:7.5.2.-]
B9057_03090  sugar ABC transporter substrate-binding protein [KO:K10227]
B9057_03085  sugar ABC transporter permease [KO:K10228]
B9057_03080  sugar ABC transporter permease [KO:K10229]
B9057_06650  alpha-glucoside ABC transporter substrate-binding protein [KO:K10232]
B9057_06655  alpha-glucoside ABC transporter permease [KO:K10233]
B9057_06670  ABC transporter ATP-binding protein [KO:K10235]
B9057_12170  ABC transporter substrate-binding protein [KO:K17241]
B9057_12165  ABC transporter permease [KO:K17242]
B9057_12160  ABC transporter permease [KO:K17243]
B9057_15785  sugar ABC transporter substrate-binding protein [KO:K10546]
B9057_15775  ABC transporter permease [KO:K10547]
B9057_15780  ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
B9057_12435  ABC transporter [KO:K07323]
B9057_10165  outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
B9057_08620  ABC transporter permease [KO:K02066]
B9057_08625  ABC transporter ATP-binding protein [KO:K02065]
B9057_02260  BMP family ABC transporter substrate-binding protein [KO:K07335]
B9057_02440  BMP family ABC transporter substrate-binding protein [KO:K07335]
B9057_02250  sugar ABC transporter permease [KO:K23535]
B9057_02450  sugar ABC transporter permease [KO:K23535]
B9057_02445  ABC transporter permease [KO:K23536]
B9057_02245  sugar ABC transporter permease [KO:K23536]
B9057_02255  heme ABC transporter ATP-binding protein [KO:K23537]
B9057_02455  ABC transporter [KO:K23537]
B9057_15675  ABC transporter permease [KO:K10440]
B9057_15670  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
B9057_04240  D-xylose ABC transporter substrate-binding protein [KO:K10543]
B9057_04235  sugar ABC transporter permease [KO:K10544]
B9057_04230  ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
B9057_10225  sugar ABC transporter [KO:K10552]
B9057_10230  ABC transporter permease [KO:K10553]
B9057_10235  sugar ABC transporter ATP-binding protein [KO:K10554]
B9057_14820  D-ribose ABC transporter substrate-binding protein [KO:K17202]
B9057_14825  sugar ABC transporter permease [KO:K17203]
B9057_14830  sugar ABC transporter ATP-binding protein [KO:K17204]
B9057_15555  rhizopine-binding protein [KO:K17213]
B9057_15560  ABC transporter [KO:K17214]
B9057_15565  ABC transporter ATP-binding protein [KO:K17215]
B9057_02765  ABC transporter substrate-binding protein [KO:K05813]
B9057_12130  ABC transporter substrate-binding protein [KO:K05813]
B9057_02760  ABC transporter permease [KO:K05814]
B9057_12125  glycerol-3-phosphate ABC transporter permease [KO:K05814]
B9057_02755  ABC transporter permease [KO:K05815]
B9057_12120  glycerol-3-phosphate ABC transporter permease [KO:K05815]
B9057_02770  ABC transporter ATP-binding protein [KO:K05816] [EC:7.6.2.10]
B9057_12115  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K05816] [EC:7.6.2.10]
B9057_13600  hypothetical protein [KO:K02040]
B9057_07045  phosphonate ABC transporter substrate-binding protein [KO:K02040]
B9057_07050  phosphate ABC transporter permease subunit PstC [KO:K02037]
B9057_07055  phosphate ABC transporter, permease protein PstA [KO:K02038]
B9057_07060  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
B9057_02810  phosphonate ABC transporter substrate-binding protein [KO:K02044]
B9057_02815  phosphonate ABC transporter, permease protein PhnE [KO:K02042]
B9057_02820  phosphonate ABC transporter, permease protein PhnE [KO:K02042]
B9057_02805  phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
B9057_01155  amino acid ABC transporter substrate-binding protein [KO:K09969]
B9057_01160  amino acid ABC transporter permease [KO:K09970]
B9057_01165  hypothetical protein [KO:K09971]
B9057_01170  ABC transporter ATP-binding protein [KO:K09972] [EC:7.4.2.1]
B9057_07000  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
B9057_10120  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
B9057_12405  branched-chain amino acid ABC transporter permease [KO:K01997]
B9057_06985  branched-chain amino acid ABC transporter permease [KO:K01997]
B9057_10125  branched-chain amino acid ABC transporter permease [KO:K01997]
B9057_06980  branched-chain amino acid ABC transporter permease [KO:K01998]
B9057_12395  branched-chain amino acid ABC transporter permease [KO:K01998]
B9057_10135  ABC transporter ATP-binding protein [KO:K01995]
B9057_12410  ABC transporter ATP-binding protein [KO:K01995]
B9057_06995  ABC transporter ATP-binding protein [KO:K01995]
B9057_10140  ABC transporter ATP-binding protein [KO:K01996]
B9057_06990  ABC transporter ATP-binding protein [KO:K01996]
B9057_16500  ABC transporter substrate-binding protein [KO:K11959]
B9057_08290  urea ABC transporter substrate-binding protein [KO:K11959]
B9057_16505  urea ABC transporter permease subunit UrtB [KO:K11960]
B9057_08285  urea ABC transporter permease subunit UrtB [KO:K11960]
B9057_16510  urea ABC transporter permease subunit UrtC [KO:K11961]
B9057_08280  urea ABC transporter permease subunit UrtC [KO:K11961]
B9057_08275  urea ABC transporter ATP-binding protein UrtD [KO:K11962]
B9057_16515  urea ABC transporter ATP-binding protein UrtD [KO:K11962]
B9057_08270  urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
B9057_16520  ABC transporter ATP-binding protein [KO:K11963]
B9057_11445  ABC transporter substrate-binding protein [KO:K13893]
B9057_11440  microcin ABC transporter permease [KO:K13894]
B9057_11435  peptide ABC transporter permease [KO:K13895]
B9057_11430  microcin ABC transporter ATP-binding protein [KO:K13896]
B9057_04690  hypothetical protein [KO:K09815]
B9057_04705  hypothetical protein [KO:K09816]
B9057_04700  znuC; zinc ABC transporter ATP-binding protein ZnuC [KO:K09817] [EC:7.2.2.20]
B9057_15240  BioY family transporter [KO:K03523]
B9057_15245  hypothetical protein [KO:K16783]
B9057_15250  cobalt ABC transporter [KO:K16784] [EC:7.6.2.-]
B9057_15335  sugar transporter [KO:K10107]
B9057_02650  capsule biosynthesis protein [KO:K10107]
B9057_15390  sugar ABC transporter permease [KO:K09688]
B9057_15330  ABC transporter ATP-binding protein [KO:K09689] [EC:7.6.2.12]
B9057_02655  ABC transporter [KO:K09689] [EC:7.6.2.12]
B9057_05030  lipoprotein-releasing system transmembrane subunit LolC [KO:K09808]
B9057_05035  ABC transporter [KO:K09810] [EC:7.6.2.-]
B9057_05435  transcriptional regulator [KO:K02195]
B9057_05430  heme exporter protein CcmB [KO:K02194]
B9057_05425  heme ABC exporter ATP-binding protein CcmA [KO:K02193] [EC:7.6.2.5]
B9057_08340  LPS export ABC transporter permease LptF [KO:K07091]
B9057_08345  LPS export ABC transporter permease LptG [KO:K11720]
B9057_13515  LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
B9057_15840  nitrous oxidase accessory protein [KO:K19341]
B9057_15835  ABC transporter ATP-binding protein [KO:K19340]
B9057_11540  cell division protein FtsX [KO:K09811]
B9057_11545  cell division protein FtsE [KO:K09812]
B9057_10335  ABC transporter ATP-binding protein [KO:K11085] [EC:7.5.2.6]
B9057_05360  metal ABC transporter permease [KO:K24821]
B9057_15370  hypothetical protein [KO:K12541]
B9057_10195  ABC transporter ATP-binding protein [KO:K12541]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
LinkDB

DBGET integrated database retrieval system