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Entry
Name
ABC transporters - Reinekea forsetii
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Reinekea forsetii [GN:
rfo ]
Gene
REIFOR_01102 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA [KO:K02020 ]
REIFOR_01253 spermidine / putrescine ABC transporter substrate-binding protein [KO:K11069 ]
REIFOR_01131 proX; L-proline glycine betaine binding protein ABC transporter protein ProX [KO:K02002 ]
REIFOR_01130 proW; L-proline glycine betaine ABC transport system permease protein ProW [KO:K02001 ]
REIFOR_02825 malE; maltose/maltodextrin ABC transporter, substrate-binding protein periplasmic protein [KO:K10108 ]
REIFOR_00228 malE; maltose/maltodextrin ABC transporter, substrate-binding protein periplasmic protein MalE [KO:K10108 ]
REIFOR_00229 malF; maltose/maltodextrin ABC transporter, permease protein MalF [KO:K10109 ]
REIFOR_00230 malG; maltose/maltodextrin ABC transporter, permease protein MalG [KO:K10110 ]
REIFOR_02488 N-acetyl-D-glucosamine ABC transport system, ATP-binding protein component [KO:K10111 ] [EC:7.5.2.-]
REIFOR_02274 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
REIFOR_02485 N-acetyl-D-glucosamine ABC transport system, sugar-binding protein [KO:K10117 ]
REIFOR_03156 aglE; alpha-glucoside ABC transporter, periplasmic substrate-binding protein AglE precursor [KO:K10232 ]
REIFOR_00786 araF; L-arabinose-binding protein periplasmic protein precursor AraF [KO:K10546 ]
REIFOR_00787 araG; L-arabinose transport ATP-binding protein AraG [KO:K10548 ] [EC:7.5.2.-]
REIFOR_00075 putative nucleoside ABC transporter, substrate-binding protein component [KO:K07335 ]
REIFOR_00076 putative nucleoside ABC transporter, ATP-binding protein component [KO:K23537 ]
REIFOR_01894 rbsB; ribose ABC transporter, periplasmic ribose-binding protein RbsB [KO:K10439 ]
REIFOR_00391 frcB; fructose ABC transporter, substrate-binding protein component FrcB [KO:K10439 ]
REIFOR_00638 ugpA; glycerol-3-phosphate ABC transporter, permease protein UgpA [KO:K17321 ]
REIFOR_00636 ugpA; glycerol-3-phosphate ABC transporter, permease protein UgpA [KO:K17322 ]
REIFOR_00641 ugpA; glycerol-3-phosphate ABC transporter, permease protein UgpA [KO:K17322 ]
REIFOR_00640 upgE; glycerol-3-phosphate ABC transporter, permease protein UgpE [KO:K17323 ]
REIFOR_00642 upgC; glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC [KO:K17325 ]
REIFOR_02732 ugpC; glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC [KO:K17325 ]
REIFOR_00365 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein PstS [KO:K02040 ]
REIFOR_00558 phosphonate ABC transporter, phosphate-binding protein periplasmic component [KO:K02044 ]
REIFOR_00645 phosphonate ABC transporter, phosphate-binding protein periplasmic component [KO:K02044 ]
REIFOR_03217 phosphonate ABC transporter phosphate-binding protein periplasmic component [KO:K02044 ]
REIFOR_00842 gltI; glutamate aspartate periplasmic binding protein precursor GltI [KO:K09969 ]
REIFOR_02980 lysine-arginine-ornithine-binding protein periplasmic protein precursor [KO:K10022 ]
REIFOR_01382 branched-chain amino acid ABC transporter, aminoacid-binding protein [KO:K01999 ]
REIFOR_00581 branched-chain amino acid ABC transporter, periplasmic substrate-binding protein [KO:K01999 ]
REIFOR_01392 livH; high-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
REIFOR_01391 livM; branched-chain amino acid transport system permease protein LivM [KO:K01998 ]
REIFOR_01393 livF; branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
REIFOR_02712 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA [KO:K15580 ]
REIFOR_02982 dipeptide-binding protein ABC transporter, periplasmic substrate-binding protein component [KO:K12368 ]
REIFOR_01402 ABC transporter, permease component, involved in lipoprotein release [KO:K09808 ]
REIFOR_02010 ccmCE; cytochrome c-type biogenesis protein CcmD, interacts with CcmCE [KO:K02196 ]
REIFOR_02011 ccmE; cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE [KO:K02195 ]
REIFOR_02012 ccmB; ABC transporter involved in cytochrome c biogenesis, CcmB subunit [KO:K02194 ]
REIFOR_03007 ABC-type multidrug transport system, ATPase and permease component [KO:K18889 ]
REIFOR_03006 ABC-type multidrug transport system, ATPase and permease component [KO:K18890 ]
REIFOR_00760 RTX toxin transporter, ATP-binding protein / leukotoxin translocation protein LktB / peptidase [KO:K11004 ]
REIFOR_01173 toxin secretion ABC transporter ATP-binding protein subunit/permease / peptidase, family C39 [KO:K13409 ]
REIFOR_02966 toxin secretion ABC transporter ATP-binding protein subunit/permease [KO:K13409 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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