Entry
Name
ABC transporters - Roseivivax sp. THAF197b
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Roseivivax sp. THAF197b [GN:
rot ]
Gene
FIV09_15265 gbuC; Glycine betaine/carnitine transport binding protein GbuC precursor [KO:K02002 ]
FIV09_11280 opuAB; Glycine betaine transport system permease protein OpuAB [KO:K02001 ]
FIV09_04400 osmF; Putative osmoprotectant uptake system substrate-binding protein OsmF precursor [KO:K05845 ]
FIV09_04385 yehW; Putative osmoprotectant uptake system permease protein YehW [KO:K05846 ]
FIV09_04395 yehY; Putative osmoprotectant uptake system permease protein YehY [KO:K05846 ]
FIV09_15175 malK3; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
FIV09_00235 ugpC2; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10111 ] [EC:7.5.2.-]
FIV09_06915 ugpC5; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
FIV09_00050 ugpC1; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
FIV09_02585 ugpC3; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112 ] [EC:7.5.2.-]
FIV09_12110 malK2; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10112 ] [EC:7.5.2.-]
FIV09_14630 mlaE; putative phospholipid ABC transporter permease protein MlaE [KO:K02066 ]
FIV09_15325 Branched-chain amino acid transport system / permease component [KO:K23535 ]
FIV09_15330 Branched-chain amino acid transport system / permease component [KO:K23536 ]
FIV09_10510 Branched-chain amino acid transport system / permease component [KO:K23536 ]
FIV09_15320 mglA4; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
FIV09_10500 mglA3; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
FIV09_03450 mglA1; Galactose/methyl galactoside import ATP-binding protein MglA [KO:K23537 ]
FIV09_06710 ugpA; sn-glycerol-3-phosphate transport system permease protein UgpA [KO:K17322 ]
FIV09_06715 ugpC4; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K17325 ]
FIV09_01675 aapJ; General L-amino acid-binding periplasmic protein AapJ precursor [KO:K09969 ]
FIV09_01680 glnM; putative glutamine ABC transporter permease protein GlnM [KO:K09970 ]
FIV09_01685 yhdY; Inner membrane amino-acid ABC transporter permease protein YhdY [KO:K09971 ]
FIV09_19120 braC2; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIV09_12055 braC1; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein precursor [KO:K01999 ]
FIV09_12045 livH4; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_19540 livH9; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_15020 livH7; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 K01998 ]
FIV09_19115 livH8; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_09250 livH3; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_00780 livH1; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_03755 livH2; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_13310 livH6; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
FIV09_12035 livF4; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01995 ]
FIV09_19550 lptB5; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIV09_15015 lptB2; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIV09_19105 lptB4; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIV09_09235 lptB1; Lipopolysaccharide export system ATP-binding protein LptB [KO:K01995 ]
FIV09_12040 livF5; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_00800 livF1; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_09240 livF3; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_15010 livF8; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_19100 livF9; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_13325 livF7; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_19555 livF10; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
FIV09_12545 livH5; High-affinity branched-chain amino acid transport system permease protein LivH [KO:K11960 ]
FIV09_12530 livF6; High-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K11963 ]
FIV09_01940 Bacterial extracellular solute-binding protein, family 5 Middle [KO:K13893 ]
FIV09_02565 znuA1; High-affinity zinc uptake system protein ZnuA precursor [KO:K09815 ]
FIV09_02700 znuA2; High-affinity zinc uptake system binding-protein ZnuA precursor [KO:K09815 ]
FIV09_11920 znuC2; High-affinity zinc uptake system ATP-binding protein ZnuC [KO:K11607 ]
FIV09_07325 lolE; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808 ]
FIV09_07330 lolD2; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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