KEGG   PATHWAY: scaa03060
Entry
scaa03060                   Pathway                                
Name
Protein export - Shewanella carassii
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
scaa03060  Protein export
scaa03060

Other DBs
GO: 0043952 0043953
Organism
Shewanella carassii [GN:scaa]
Gene
TUM17387_02170  secY; protein translocase subunit SecY [KO:K03076]
TUM17387_01830  secE; protein translocase subunit SecE [KO:K03073]
TUM17387_28910  secG; preprotein translocase subunit SecG [KO:K03075]
TUM17387_14810  secD_1; protein translocase subunit SecD [KO:K03072]
TUM17387_28990  secD_2; protein translocase subunit SecD [KO:K03072]
TUM17387_14820  secF; protein-export membrane protein SecF [KO:K03074]
TUM17387_28980  secF2; protein-export membrane protein SecF [KO:K03074]
TUM17387_14800  yajC; preprotein translocase subunit YajC [KO:K03210]
TUM17387_39150  yidC; membrane protein insertase YidC [KO:K03217]
TUM17387_03720  secA; protein translocase subunit SecA [KO:K03070] [EC:7.4.2.8]
TUM17387_38790  secB; protein-export protein SecB [KO:K03071]
TUM17387_11390  ffh; signal recognition particle protein [KO:K03106] [EC:3.6.5.4]
TUM17387_36890  hypothetical protein [KO:K03110]
TUM17387_25760  arsenic-transporting ATPase [KO:K01551] [EC:7.3.2.7 7.3.-.-]
TUM17387_34480  tatA; Sec-independent protein translocase protein TatA [KO:K03116]
TUM17387_34490  tatB; Sec-independent protein translocase protein TatB [KO:K03117]
TUM17387_34500  tatC; Sec-independent protein translocase protein TatC [KO:K03118]
TUM17387_11300  lepB; signal peptidase I [KO:K03100] [EC:3.4.21.89]
TUM17387_11790  lspA; lipoprotein signal peptidase [KO:K03101] [EC:3.4.23.36]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   
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