KEGG   PATHWAY: senn01100
Entry
senn01100                   Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Class
Pathway map
senn01100  Metabolic pathways
senn01100

Module
senn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:senn01100]
senn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:senn01100]
senn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:senn01100]
senn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:senn01100]
senn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:senn01100]
senn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:senn01100]
senn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:senn01100]
senn_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:senn01100]
senn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:senn01100]
senn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:senn01100]
senn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:senn01100]
senn_M00012  Glyoxylate cycle [PATH:senn01100]
senn_M00015  Proline biosynthesis, glutamate => proline [PATH:senn01100]
senn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:senn01100]
senn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:senn01100]
senn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:senn01100]
senn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:senn01100]
senn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:senn01100]
senn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:senn01100]
senn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:senn01100]
senn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:senn01100]
senn_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:senn01100]
senn_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:senn01100]
senn_M00026  Histidine biosynthesis, PRPP => histidine [PATH:senn01100]
senn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:senn01100]
senn_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:senn01100]
senn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:senn01100]
senn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:senn01100]
senn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:senn01100]
senn_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:senn01100]
senn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:senn01100]
senn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:senn01100]
senn_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:senn01100]
senn_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:senn01100]
senn_M00063  CMP-KDO biosynthesis [PATH:senn01100]
senn_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:senn01100]
senn_M00082  Fatty acid biosynthesis, initiation [PATH:senn01100]
senn_M00083  Fatty acid biosynthesis, elongation [PATH:senn01100]
senn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:senn01100]
senn_M00087  beta-Oxidation [PATH:senn01100]
senn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:senn01100]
senn_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:senn01100]
senn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:senn01100]
senn_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:senn01100]
senn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:senn01100]
senn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:senn01100]
senn_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:senn01100]
senn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:senn01100]
senn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:senn01100]
senn_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:senn01100]
senn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:senn01100]
senn_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:senn01100]
senn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:senn01100]
senn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:senn01100]
senn_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:senn01100]
senn_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:senn01100]
senn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:senn01100]
senn_M00149  Succinate dehydrogenase, prokaryotes [PATH:senn01100]
senn_M00150  Fumarate reductase, prokaryotes [PATH:senn01100]
senn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:senn01100]
senn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:senn01100]
senn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:senn01100]
senn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:senn01100]
senn_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:senn01100]
senn_M00417  Cytochrome o ubiquinol oxidase [PATH:senn01100]
senn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:senn01100]
senn_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:senn01100]
senn_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:senn01100]
senn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:senn01100]
senn_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:senn01100]
senn_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:senn01100]
senn_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:senn01100]
senn_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:senn01100]
senn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:senn01100]
senn_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:senn01100]
senn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:senn01100]
senn_M00621  Glycine cleavage system [PATH:senn01100]
senn_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:senn01100]
senn_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:senn01100]
senn_M00793  dTDP-L-rhamnose biosynthesis [PATH:senn01100]
senn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:senn01100]
senn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:senn01100]
senn_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:senn01100]
senn_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:senn01100]
senn_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:senn01100]
senn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:senn01100]
senn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:senn01100]
senn_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:senn01100]
senn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:senn01100]
senn_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:senn01100]
senn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:senn01100]
senn_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:senn01100]
senn_M00970  Proline degradation, proline => glutamate [PATH:senn01100]
Organism
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1 [GN:senn]
Related
pathway
senn00010  Glycolysis / Gluconeogenesis
senn00020  Citrate cycle (TCA cycle)
senn00030  Pentose phosphate pathway
senn00040  Pentose and glucuronate interconversions
senn00051  Fructose and mannose metabolism
senn00052  Galactose metabolism
senn00053  Ascorbate and aldarate metabolism
senn00061  Fatty acid biosynthesis
senn00071  Fatty acid degradation
senn00130  Ubiquinone and other terpenoid-quinone biosynthesis
senn00190  Oxidative phosphorylation
senn00220  Arginine biosynthesis
senn00230  Purine metabolism
senn00240  Pyrimidine metabolism
senn00250  Alanine, aspartate and glutamate metabolism
senn00260  Glycine, serine and threonine metabolism
senn00261  Monobactam biosynthesis
senn00270  Cysteine and methionine metabolism
senn00280  Valine, leucine and isoleucine degradation
senn00290  Valine, leucine and isoleucine biosynthesis
senn00300  Lysine biosynthesis
senn00310  Lysine degradation
senn00330  Arginine and proline metabolism
senn00332  Carbapenem biosynthesis
senn00340  Histidine metabolism
senn00350  Tyrosine metabolism
senn00360  Phenylalanine metabolism
senn00361  Chlorocyclohexane and chlorobenzene degradation
senn00362  Benzoate degradation
senn00364  Fluorobenzoate degradation
senn00380  Tryptophan metabolism
senn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
senn00401  Novobiocin biosynthesis
senn00410  beta-Alanine metabolism
senn00430  Taurine and hypotaurine metabolism
senn00440  Phosphonate and phosphinate metabolism
senn00450  Selenocompound metabolism
senn00460  Cyanoamino acid metabolism
senn00470  D-Amino acid metabolism
senn00480  Glutathione metabolism
senn00500  Starch and sucrose metabolism
senn00520  Amino sugar and nucleotide sugar metabolism
senn00521  Streptomycin biosynthesis
senn00523  Polyketide sugar unit biosynthesis
senn00525  Acarbose and validamycin biosynthesis
senn00540  Lipopolysaccharide biosynthesis
senn00541  O-Antigen nucleotide sugar biosynthesis
senn00542  O-Antigen repeat unit biosynthesis
senn00543  Exopolysaccharide biosynthesis
senn00550  Peptidoglycan biosynthesis
senn00552  Teichoic acid biosynthesis
senn00561  Glycerolipid metabolism
senn00562  Inositol phosphate metabolism
senn00564  Glycerophospholipid metabolism
senn00565  Ether lipid metabolism
senn00592  alpha-Linolenic acid metabolism
senn00600  Sphingolipid metabolism
senn00620  Pyruvate metabolism
senn00623  Toluene degradation
senn00625  Chloroalkane and chloroalkene degradation
senn00626  Naphthalene degradation
senn00627  Aminobenzoate degradation
senn00630  Glyoxylate and dicarboxylate metabolism
senn00633  Nitrotoluene degradation
senn00640  Propanoate metabolism
senn00643  Styrene degradation
senn00650  Butanoate metabolism
senn00660  C5-Branched dibasic acid metabolism
senn00670  One carbon pool by folate
senn00680  Methane metabolism
senn00710  Carbon fixation by Calvin cycle
senn00720  Other carbon fixation pathways
senn00730  Thiamine metabolism
senn00740  Riboflavin metabolism
senn00750  Vitamin B6 metabolism
senn00760  Nicotinate and nicotinamide metabolism
senn00770  Pantothenate and CoA biosynthesis
senn00780  Biotin metabolism
senn00785  Lipoic acid metabolism
senn00790  Folate biosynthesis
senn00860  Porphyrin metabolism
senn00900  Terpenoid backbone biosynthesis
senn00907  Pinene, camphor and geraniol degradation
senn00910  Nitrogen metabolism
senn00920  Sulfur metabolism
senn00930  Caprolactam degradation
senn00946  Degradation of flavonoids
senn00999  Biosynthesis of various plant secondary metabolites
senn01040  Biosynthesis of unsaturated fatty acids
senn01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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