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Entry
Name
ABC transporters - Sinorhizobium fredii HH103
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Pathway map
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Organism
Sinorhizobium fredii HH103 [GN:
sfh ]
Gene
SFHH103_05983 Putative sulfate ABC transporter, periplasmic sulphate-binding protein [KO:K23163 ]
SFHH103_05453 tauC; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15552 ]
SFHH103_06626 putative ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [KO:K15553 ]
SFHH103_06624 putative ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15554 ]
SFHH103_05620 putative periplasmic spermidine/putrescine-binding protein or ABC transporter [KO:K11069 ]
SFHH103_05622 probable ABC transporter, putrescine transport system permease protein [KO:K11071 ]
SFHH103_00374 potF; Spermidine/putrescine-binding periplasmic protein SPBP; Flags: Precursor [KO:K11073 ]
SFHH103_04896 putative Glycine betaine-binding periplasmic protein Flags: Precursor [KO:K02002 ]
SFHH103_02236 prow1; Glycine betaine/L-proline transport system permease protein proW [KO:K02001 ]
SFHH103_00731 hisW; Glycine betaine/L-proline transport system permease protein proW [KO:K02001 ]
SFHH103_04895 proW2; Glycine betaine/L-proline transport system permease protein ProW [KO:K02001 ]
SFHH103_05755 Putative glycine betaine ABC transporter, periplasmic substrate-binding protein [KO:K05845 ]
SFHH103_01710 ugpc1; ABC-type sugar transport system, ATPase component [KO:K10112 ] [EC:7.5.2.-]
SFHH103_05158 ATP-binding cassette domain of the carbohydrate and solute transporters-like [KO:K10112 ] [EC:7.5.2.-]
SFHH103_05970 Putative sugar uptake ABC transporter, ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SFHH103_03735 predicted MalK, ABC-type sugar transport systems,ATPase component MalK [KO:K10112 ] [EC:7.5.2.-]
SFHH103_02411 malK; ABC transporter, ATP-binding protein,Maltose/maltodextrin import [KO:K10112 ] [EC:7.5.2.-]
SFHH103_05556 putative sugar uptake ABC transporter ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SFHH103_04105 aglK; K10111 maltose/maltodextrin transport system ATP-binding protein [KO:K10112 ] [EC:7.5.2.-]
SFHH103_01564 Laminin subunit alpha-2 Laminin M chain; Merosin heavy chain; Flags: Precursor [KO:K02067 ]
SFHH103_01565 Phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter [KO:K02065 ]
SFHH103_05542 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K10439 ]
SFHH103_01617 rbsB; HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor [KO:K10439 ]
SFHH103_01615 rbsC; Autoinducer 2 import system permease protein lsrD AI-2 import system permease protein lsrD [KO:K10440 ]
SFHH103_05561 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor [KO:K23508 ]
SFHH103_00286 rhaT; ATP-binding component of monosaccharide transport system [KO:K10562 ] [EC:7.5.2.-]
SFHH103_05718 phoD; Putative phosphate/phosphonate ABC transporter, periplasmic substrate-binding protein [KO:K02044 ]
SFHH103_05719 phoE; Putative phosphate/phosphonate ABC transporter, permease protein [KO:K02042 ]
SFHH103_05720 phoT; Putative phosphate/phosphonate ABC transporter, permease protein [KO:K02042 ]
SFHH103_02502 gltI; Glutamate/aspartate periplasmic-binding protein Flags: Precursor [KO:K10001 ]
SFHH103_06582 nocT; amino acid ABC transporter, periplasmic amino acid-binding protein [KO:K10018 ]
SFHH103_06581 nocQ; predicted ABC-type arginine transport system, permease component [KO:K10020 ]
SFHH103_01201 bztA; Glutamate/glutamine/aspartate/asparagine-binding protein bztA Flags: Precursor [KO:K09969 ]
SFHH103_01199 aapM; Inner membrane amino-acid ABC transporter permease protein yhdY [KO:K09971 ]
SFHH103_05793 Putative amino acid ABC transporter, periplasmic amino-acid binding protein [KO:K01999 ]
SFHH103_05872 Putative branched-chain amino acid ABC transporter, peroplasmic substrate-binding protein [KO:K01999 ]
SFHH103_00845 livh1; Autoinducer 2 import system permease protein lsrC AI-2 import system permease protein lsrC [KO:K01997 ]
SFHH103_03603 putative branched-chain amino acid transport system / permease component [KO:K01997 ]
SFHH103_05871 Putative branched-chain amino acid ABC transporter, permease component [KO:K01997 ]
SFHH103_03083 High-affinity branched-chain amino acid transport system permease protein [KO:K01997 ]
SFHH103_06453 livH; High-affinity branched-chain amino acid transport system permease protein livH [KO:K01997 ]
SFHH103_03604 putative branched-chain amino acid transport system / permease component [KO:K01998 ]
SFHH103_03082 High-affinity branched-chain amino acid transport system permease protein LivM [KO:K01998 ]
SFHH103_06452 livM; High-affinity branched-chain amino acid transport system permease protein livM [KO:K01998 ]
SFHH103_05870 Putative branched-chain amino acid ABC transporter, permease component [KO:K01998 ]
SFHH103_02547 livg3; branched-chain amino acid transport system ATP-binding protein [KO:K01995 ]
SFHH103_05869 Putative branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
SFHH103_06451 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
SFHH103_03606 putative branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
SFHH103_05868 Putative branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
SFHH103_06510 putative ABC superfamily ATP binding cassette transporter, binding protein [KO:K11959 ]
SFHH103_06506 Aputative ABC superfamily ATP binding cassette transporter, ABC protein [KO:K11963 ]
SFHH103_05671 oppA; oligopeptide ABC transporter, periplasmic oligopeptide-binding protein [KO:K15580 ]
SFHH103_00391 dppc1; Binding-protein-dependent transport systems inner membrane component [KO:K12370 ]
SFHH103_00392 dppd1; ABC-type dipeptide/oligopeptide/nickel transport system; ATPase component [KO:K12371 ]
SFHH103_00566 Sulfate/thiosulfate import ATP-binding protein CysA-like [KO:K16784 ] [EC:7.6.2.-]
SFHH103_06321 rkpT2; putative capsular polysaccharide export ABC-2 transporter permease [KO:K09688 ]
SFHH103_06303 rkpT1; putative capsular polysaccharide export ABC-2 transporter permease [KO:K09688 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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