PATHWAY: smd01100 Help Entry smd01100                    Pathway                                 Name Metabolic pathways - Sinorhizobium medicae Class BRITE hierarchy Pathway map smd01100   Metabolic pathways Module smd_M00002   Glycolysis, core module involving three-carbon compounds [PATH:smd01100] smd_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smd01100] smd_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smd01100] smd_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:smd01100] smd_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:smd01100] smd_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smd01100] smd_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smd01100] smd_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:smd01100] smd_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smd01100] smd_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smd01100] smd_M00012   Glyoxylate cycle [PATH:smd01100] smd_M00015   Proline biosynthesis, glutamate => proline [PATH:smd01100] smd_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smd01100] smd_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smd01100] smd_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smd01100] smd_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:smd01100] smd_M00021   Cysteine biosynthesis, serine => cysteine [PATH:smd01100] smd_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smd01100] smd_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:smd01100] smd_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:smd01100] smd_M00026   Histidine biosynthesis, PRPP => histidine [PATH:smd01100] smd_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:smd01100] smd_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:smd01100] smd_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:smd01100] smd_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:smd01100] smd_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smd01100] smd_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:smd01100] smd_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smd01100] smd_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smd01100] smd_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smd01100] smd_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smd01100] smd_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:smd01100] smd_M00082   Fatty acid biosynthesis, initiation [PATH:smd01100] smd_M00083   Fatty acid biosynthesis, elongation [PATH:smd01100] smd_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:smd01100] smd_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:smd01100] smd_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smd01100] smd_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smd01100] smd_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:smd01100] smd_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:smd01100] smd_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:smd01100] smd_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:smd01100] smd_M00140   C1-unit interconversion, prokaryotes [PATH:smd01100] smd_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:smd01100] smd_M00149   Succinate dehydrogenase, prokaryotes [PATH:smd01100] smd_M00151   Cytochrome bc1 complex respiratory unit [PATH:smd01100] smd_M00155   Cytochrome c oxidase, prokaryotes [PATH:smd01100] smd_M00156   Cytochrome c oxidase, cbb3-type [PATH:smd01100] smd_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:smd01100] smd_M00169   CAM (Crassulacean acid metabolism), light [PATH:smd01100] smd_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:smd01100] smd_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smd01100] smd_M00417   Cytochrome o ubiquinol oxidase [PATH:smd01100] smd_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smd01100] smd_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:smd01100] smd_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smd01100] smd_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:smd01100] smd_M00555   Betaine biosynthesis, choline => betaine [PATH:smd01100] smd_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:smd01100] smd_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smd01100] smd_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smd01100] smd_M00621   Glycine cleavage system [PATH:smd01100] smd_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:smd01100] smd_M00793   dTDP-L-rhamnose biosynthesis [PATH:smd01100] smd_M00844   Arginine biosynthesis, ornithine => arginine [PATH:smd01100] smd_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smd01100] smd_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smd01100] smd_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smd01100] smd_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smd01100] smd_M00919   Ectoine degradation, ectoine => aspartate [PATH:smd01100] smd_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:smd01100] smd_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:smd01100] smd_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:smd01100] smd_M00970   Proline degradation, proline => glutamate [PATH:smd01100] smd_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:smd01100] Organism Sinorhizobium medicae [GN:smd] Related pathway smd00010   Glycolysis / Gluconeogenesis smd00020   Citrate cycle (TCA cycle) smd00030   Pentose phosphate pathway smd00040   Pentose and glucuronate interconversions smd00051   Fructose and mannose metabolism smd00052   Galactose metabolism smd00053   Ascorbate and aldarate metabolism smd00061   Fatty acid biosynthesis smd00071   Fatty acid degradation smd00130   Ubiquinone and other terpenoid-quinone biosynthesis smd00190   Oxidative phosphorylation smd00220   Arginine biosynthesis smd00230   Purine metabolism smd00240   Pyrimidine metabolism smd00250   Alanine, aspartate and glutamate metabolism smd00260   Glycine, serine and threonine metabolism smd00261   Monobactam biosynthesis smd00270   Cysteine and methionine metabolism smd00280   Valine, leucine and isoleucine degradation smd00290   Valine, leucine and isoleucine biosynthesis smd00300   Lysine biosynthesis smd00310   Lysine degradation smd00330   Arginine and proline metabolism smd00332   Carbapenem biosynthesis smd00340   Histidine metabolism smd00350   Tyrosine metabolism smd00360   Phenylalanine metabolism smd00361   Chlorocyclohexane and chlorobenzene degradation smd00362   Benzoate degradation smd00364   Fluorobenzoate degradation smd00380   Tryptophan metabolism smd00400   Phenylalanine, tyrosine and tryptophan biosynthesis smd00401   Novobiocin biosynthesis smd00410   beta-Alanine metabolism smd00430   Taurine and hypotaurine metabolism smd00440   Phosphonate and phosphinate metabolism smd00450   Selenocompound metabolism smd00460   Cyanoamino acid metabolism smd00470   D-Amino acid metabolism smd00480   Glutathione metabolism smd00500   Starch and sucrose metabolism smd00511   Other glycan degradation smd00520   Amino sugar and nucleotide sugar metabolism smd00521   Streptomycin biosynthesis smd00523   Polyketide sugar unit biosynthesis smd00525   Acarbose and validamycin biosynthesis smd00540   Lipopolysaccharide biosynthesis smd00541   O-Antigen nucleotide sugar biosynthesis smd00543   Exopolysaccharide biosynthesis smd00550   Peptidoglycan biosynthesis smd00552   Teichoic acid biosynthesis smd00561   Glycerolipid metabolism smd00562   Inositol phosphate metabolism smd00564   Glycerophospholipid metabolism smd00600   Sphingolipid metabolism smd00620   Pyruvate metabolism smd00622   Xylene degradation smd00623   Toluene degradation smd00625   Chloroalkane and chloroalkene degradation smd00626   Naphthalene degradation smd00627   Aminobenzoate degradation smd00630   Glyoxylate and dicarboxylate metabolism smd00633   Nitrotoluene degradation smd00640   Propanoate metabolism smd00643   Styrene degradation smd00650   Butanoate metabolism smd00660   C5-Branched dibasic acid metabolism smd00670   One carbon pool by folate smd00680   Methane metabolism smd00710   Carbon fixation by Calvin cycle smd00720   Other carbon fixation pathways smd00730   Thiamine metabolism smd00740   Riboflavin metabolism smd00750   Vitamin B6 metabolism smd00760   Nicotinate and nicotinamide metabolism smd00770   Pantothenate and CoA biosynthesis smd00780   Biotin metabolism smd00785   Lipoic acid metabolism smd00790   Folate biosynthesis smd00791   Atrazine degradation smd00860   Porphyrin metabolism smd00900   Terpenoid backbone biosynthesis smd00906   Carotenoid biosynthesis smd00907   Pinene, camphor and geraniol degradation smd00910   Nitrogen metabolism smd00920   Sulfur metabolism smd00930   Caprolactam degradation smd00946   Degradation of flavonoids smd00999   Biosynthesis of various plant secondary metabolites smd01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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