KEGG   PATHWAY: smd00330
Entry
smd00330                    Pathway                                
Name
Arginine and proline metabolism - Sinorhizobium medicae
Class
Metabolism; Amino acid metabolism
Pathway map
smd00330  Arginine and proline metabolism
smd00330

Module
smd_M00015  Proline biosynthesis, glutamate => proline [PATH:smd00330]
smd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:smd00330]
smd_M00970  Proline degradation, proline => glutamate [PATH:smd00330]
Other DBs
GO: 0006525 0006560
Organism
Sinorhizobium medicae [GN:smd]
Gene
Smed_2766  Creatininase [KO:K01470] [EC:3.5.2.10]
Smed_5333  N-isopropylammelide isopropylaminohydrolase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
Smed_4007  Amidohydrolase 3 [KO:K01485] [EC:3.5.4.1 3.5.4.21]
Smed_3307  5-oxoprolinase (ATP-hydrolyzing) [KO:K01473] [EC:3.5.2.14]
Smed_3664  5-oxoprolinase (ATP-hydrolyzing) [KO:K01473] [EC:3.5.2.14]
Smed_3663  5-oxoprolinase (ATP-hydrolyzing) [KO:K01474] [EC:3.5.2.14]
Smed_3306  5-oxoprolinase (ATP-hydrolyzing) [KO:K01474] [EC:3.5.2.14]
Smed_5196  Lysine decarboxylase [KO:K01584] [EC:4.1.1.19]
Smed_0860  putative agmatinase [KO:K01480] [EC:3.5.3.11]
Smed_5195  Ornithine decarboxylase [KO:K01581] [EC:4.1.1.17]
Smed_2772  Orn/DAP/Arg decarboxylase 2 [KO:K01581] [EC:4.1.1.17]
Smed_4156  carboxynorspermidine decarboxylase [KO:K13747] [EC:4.1.1.96]
Smed_5596  aminotransferase class-III [KO:K12256] [EC:2.6.1.113]
Smed_4632  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Smed_5602  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Smed_5721  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Smed_2414  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Smed_2191  aldehyde dehydrogenase [KO:K00137] [EC:1.2.1.19]
Smed_0178  aminotransferase class I and II [KO:K12252] [EC:2.6.1.84]
Smed_5337  Amidase [KO:K01426] [EC:3.5.1.4]
Smed_5068  Amidase [KO:K01426] [EC:3.5.1.4]
Smed_0301  FAD dependent oxidoreductase [KO:K09471] [EC:1.4.3.-]
Smed_2415  FAD dependent oxidoreductase [KO:K09471] [EC:1.4.3.-]
Smed_2849  FAD dependent oxidoreductase [KO:K09471] [EC:1.4.3.-]
Smed_2891  arginase [KO:K01476] [EC:3.5.3.1]
Smed_5245  Arginase/agmatinase/formiminoglutamase [KO:K01476] [EC:3.5.3.1]
Smed_5474  pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
Smed_4127  NADP oxidoreductase coenzyme F420-dependent [KO:K00286] [EC:1.5.1.2]
Smed_2249  pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
Smed_0092  delta-1-pyrroline-5-carboxylate dehydrogenase [KO:K13821] [EC:1.5.5.2 1.2.1.88]
Smed_3010  glutamate 5-kinase [KO:K00931] [EC:2.7.2.11]
Smed_3011  gamma-glutamyl phosphate reductase [KO:K00147] [EC:1.2.1.41]
Smed_0717  proline iminopeptidase [KO:K01259] [EC:3.4.11.5]
Smed_2233  aminotransferase class I and II [KO:K00812] [EC:2.6.1.1]
Smed_3160  aminotransferase class I and II [KO:K00812] [EC:2.6.1.1]
Smed_1094  aminotransferase class IV [KO:K00824] [EC:2.6.1.21]
Smed_5171  aminotransferase class IV [KO:K00824] [EC:2.6.1.21]
Smed_3861  proline racemase [KO:K22548] [EC:4.2.1.77]
Smed_3862  protein of unknown function DUF521 [KO:K09123] [EC:4.2.1.171]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
smd00020  Citrate cycle (TCA cycle)
smd00220  Arginine biosynthesis
smd00250  Alanine, aspartate and glutamate metabolism
smd00260  Glycine, serine and threonine metabolism
smd00270  Cysteine and methionine metabolism
smd00310  Lysine degradation
smd00410  beta-Alanine metabolism
smd00470  D-Amino acid metabolism
smd00480  Glutathione metabolism
smd00630  Glyoxylate and dicarboxylate metabolism
smd00650  Butanoate metabolism
smd00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   
LinkDB

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