KEGG   PATHWAY: spac02010
Entry
spac02010                   Pathway                                
Name
ABC transporters - Streptomyces pactum
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
spac02010  ABC transporters
spac02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptomyces pactum [GN:spac]
Gene
B1H29_36500  sulfate ABC transporter substrate-binding protein [KO:K15553]
B1H29_08225  sulfate ABC transporter substrate-binding protein [KO:K15553]
B1H29_00560  sulfate ABC transporter substrate-binding protein [KO:K15553]
B1H29_00570  sulfate ABC transporter permease [KO:K15554]
B1H29_36490  sulfate ABC transporter permease [KO:K15554]
B1H29_08235  sulfate ABC transporter permease [KO:K15554]
B1H29_36495  sulfate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
B1H29_08230  sulfate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
B1H29_00565  sulfate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
B1H29_30795  molybdate ABC transporter substrate-binding protein [KO:K02020]
B1H29_30790  molybdenum ABC transporter permease subunit [KO:K02018]
B1H29_30785  ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
B1H29_10480  thiamine ABC transporter substrate-binding protein [KO:K02064]
B1H29_10475  iron ABC transporter permease [KO:K02063]
B1H29_10470  ABC transporter ATP-binding protein [KO:K02062] [EC:7.6.2.15]
B1H29_10385  ABC transporter substrate-binding protein [KO:K11069]
B1H29_10370  ABC transporter permease [KO:K11070]
B1H29_10375  ABC transporter permease [KO:K11071]
B1H29_10380  spermidine/putrescine ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
B1H29_14300  glycine/betaine ABC transporter substrate-binding protein [KO:K02002]
B1H29_29470  glycine/betaine ABC transporter permease [KO:K02001 K02002]
B1H29_14305  glycine/betaine ABC transporter permease [KO:K02001]
B1H29_14310  glycine/betaine ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
B1H29_29465  glycine/betaine ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
B1H29_22830  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
B1H29_08395  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
B1H29_22835  permease [KO:K05846]
B1H29_22845  ABC transporter permease [KO:K05846]
B1H29_08400  ABC transporter permease [KO:K05846]
B1H29_08405  ABC transporter permease [KO:K05846]
B1H29_22840  polyamine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
B1H29_20395  ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
B1H29_29005  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
B1H29_26240  sugar ABC transporter substrate-binding protein [KO:K15770]
B1H29_04355  sugar ABC transporter substrate-binding protein [KO:K15770]
B1H29_26245  ABC transporter permease [KO:K15771]
B1H29_04350  ABC transporter permease [KO:K15771]
B1H29_26250  ABC transporter permease [KO:K15772]
B1H29_04345  ABC transporter permease [KO:K15772]
B1H29_03815  sugar ABC transporter substrate-binding protein [KO:K10117]
B1H29_03810  ABC transporter permease [KO:K10118]
B1H29_03805  sugar ABC transporter permease [KO:K10119]
B1H29_27970  sugar ABC transporter substrate-binding protein [KO:K10227]
B1H29_27965  sugar ABC transporter permease [KO:K10228]
B1H29_27960  sugar ABC transporter permease [KO:K10229]
B1H29_22620  sugar ABC transporter substrate-binding protein [KO:K10232]
B1H29_27725  sugar ABC transporter substrate-binding protein [KO:K10232]
B1H29_22615  ABC transporter permease [KO:K10233]
B1H29_27730  ABC transporter permease [KO:K10233]
B1H29_22610  sugar ABC transporter permease [KO:K10234]
B1H29_27735  sugar ABC transporter permease [KO:K10234]
B1H29_10300  Tat pathway signal sequence domain protein [KO:K17318]
B1H29_08725  sugar ABC transporter substrate-binding protein [KO:K17318]
B1H29_10295  polysaccharide ABC transporter ATP-binding protein [KO:K17319]
B1H29_08735  protein lplB [KO:K17319]
B1H29_10290  ABC transporter permease [KO:K17320]
B1H29_08730  sugar ABC transporter permease [KO:K17320]
B1H29_27715  ABC transporter substrate-binding protein [KO:K10236]
B1H29_18050  ABC transporter substrate-binding protein [KO:K10236]
B1H29_08690  carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein [KO:K10200]
B1H29_08685  ABC transporter permease [KO:K10201]
B1H29_08680  sugar ABC transporter permease [KO:K10202]
B1H29_23465  sugar-binding protein [KO:K10240]
B1H29_35260  sugar-binding protein [KO:K10240]
B1H29_23460  ABC transporter permease [KO:K10241]
B1H29_35265  ABC transporter permease [KO:K10241]
B1H29_23455  sugar ABC transporter permease [KO:K10242]
B1H29_35270  sugar ABC transporter permease [KO:K10242]
B1H29_12390  sugar transporter [KO:K17329]
B1H29_22765  ABC transporter substrate-binding protein [KO:K17329]
B1H29_01990  sugar transporter [KO:K17329]
B1H29_03985  sugar transporter [KO:K17329]
B1H29_12385  sugar ABC transporter permease [KO:K17330]
B1H29_22770  sugar transporter [KO:K17330]
B1H29_01995  sugar ABC transporter permease [KO:K17330]
B1H29_12380  sugar ABC transporter permease [KO:K17331]
B1H29_22775  sugar ABC transporter permease [KO:K17331]
B1H29_02000  sugar ABC transporter permease [KO:K17331]
B1H29_04165  ABC transporter substrate-binding protein [KO:K17244]
B1H29_04160  ABC transporter permease [KO:K17245]
B1H29_04155  ABC transporter permease [KO:K17246]
B1H29_32945  sugar-binding protein [KO:K17326]
B1H29_32950  ABC transporter [KO:K17327]
B1H29_32955  ABC transporter permease [KO:K17328]
B1H29_25380  sugar ABC transporter substrate-binding protein [KO:K10546]
B1H29_25370  sugar ABC transporter permease [KO:K10547]
B1H29_25375  ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
B1H29_14025  BMP family ABC transporter substrate-binding protein [KO:K07335]
B1H29_14030  BMP family ABC transporter substrate-binding protein [KO:K07335]
B1H29_14015  ABC transporter permease [KO:K23535]
B1H29_14010  ABC transporter permease [KO:K23536]
B1H29_14020  heme ABC transporter ATP-binding protein [KO:K23537]
B1H29_23785  transporter [KO:K10439 K10440]
B1H29_06240  sugar ABC transporter substrate-binding protein [KO:K10439]
B1H29_06245  ABC transporter [KO:K10440]
B1H29_23790  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
B1H29_06250  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
B1H29_23775  D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
B1H29_17525  ABC transporter substrate-binding protein [KO:K10543]
B1H29_08670  ABC transporter substrate-binding protein [KO:K10543]
B1H29_08660  ABC transporter permease [KO:K10544]
B1H29_08665  ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
B1H29_35480  rhamnose ABC transporter substrate-binding protein [KO:K10559]
B1H29_35490  ATPase [KO:K10560]
B1H29_35485  ATPase [KO:K10561]
B1H29_35495  D-xylose ABC transporter ATP-binding protein [KO:K10562] [EC:7.5.2.-]
B1H29_25345  phosphate-binding protein [KO:K02040]
B1H29_19925  phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
B1H29_19920  phosphate ABC transporter permease subunit PstC [KO:K02037]
B1H29_19915  phosphate ABC transporter, permease protein PstA [KO:K02038]
B1H29_19910  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
B1H29_02515  hypothetical protein [KO:K02044]
B1H29_02525  phosphonate ABC transporter, permease protein PhnE [KO:K02042]
B1H29_02520  hypothetical protein [KO:K02041] [EC:7.3.2.2]
B1H29_09885  glutamate-binding protein [KO:K10005]
B1H29_09890  glutamate ABC transporter permease [KO:K10006]
B1H29_09895  amino acid ABC transporter permease [KO:K10007]
B1H29_09880  glutamate ABC transporter ATP-binding protein [KO:K10008] [EC:7.4.2.1]
B1H29_21085  hypothetical protein [KO:K01999]
B1H29_27335  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
B1H29_27330  branched-chain amino acid ABC transporter permease [KO:K01997]
B1H29_02960  branched-chain amino acid ABC transporter permease [KO:K01997]
B1H29_27325  branched-chain amino acid ABC transporter permease [KO:K01998]
B1H29_02955  branched-chain amino acid ABC transporter permease [KO:K01998]
B1H29_27320  ABC transporter ATP-binding protein [KO:K01995]
B1H29_02965  ABC transporter ATP-binding protein [KO:K01995]
B1H29_27315  ABC transporter ATP-binding protein [KO:K01996]
B1H29_02970  ABC transporter ATP-binding protein [KO:K01996]
B1H29_29790  metal ABC transporter substrate-binding protein [KO:K02073]
B1H29_29785  ABC transporter permease [KO:K02072]
B1H29_29780  methionine ABC transporter ATP-binding protein [KO:K02071]
B1H29_12990  peptide ABC transporter substrate-binding protein [KO:K15580]
B1H29_12985  ABC transporter permease [KO:K15581]
B1H29_12980  peptide ABC transporter permease [KO:K15582]
B1H29_12975  ABC transporter ATP-binding protein [KO:K15583]
B1H29_12970  ABC transporter ATP-binding protein [KO:K10823]
B1H29_23545  ABC transporter substrate-binding protein [KO:K25287]
B1H29_01770  iron siderophore-binding protein [KO:K25286]
B1H29_01785  iron ABC transporter permease [KO:K23186]
B1H29_28600  iron ABC transporter permease [KO:K23186]
B1H29_01780  iron ABC transporter [KO:K23187]
B1H29_28605  hypothetical protein [KO:K23187]
B1H29_01775  ABC transporter [KO:K23188] [EC:7.2.2.17 7.2.2.-]
B1H29_28610  ABC transporter [KO:K23188] [EC:7.2.2.17 7.2.2.-]
B1H29_34265  ABC transporter substrate-binding protein [KO:K23227]
B1H29_34260  ABC transporter permease [KO:K23228]
B1H29_34270  fecE; iron-dicitrate transporter ATP-binding subunit [KO:K10829] [EC:7.2.2.16]
B1H29_24980  zinc ABC transporter substrate-binding protein [KO:K09815]
B1H29_24970  ABC transporter [KO:K09816]
B1H29_24975  ABC transporter [KO:K09817] [EC:7.2.2.20]
B1H29_09115  cobalt ABC transporter substrate-binding protein CbiN [KO:K02009]
B1H29_21680  cobalt ABC transporter permease [KO:K02007]
B1H29_09110  cobalamin biosynthesis protein CbiM [KO:K02007]
B1H29_21675  cobalt ECF transporter T component CbiQ [KO:K02008]
B1H29_09120  cobalt ECF transporter T component CbiQ [KO:K02008]
B1H29_21670  cobalt ABC transporter ATP-binding protein [KO:K02006]
B1H29_09125  cobalt ABC transporter [KO:K02006]
B1H29_24235  biotin transporter BioY [KO:K03523]
B1H29_25765  cobalt ABC transporter permease [KO:K16785]
B1H29_22555  ABC transporter [KO:K09692]
B1H29_05465  ABC transporter [KO:K09692]
B1H29_22550  teichoic acid ABC transporter ATP-binding protein [KO:K09693] [EC:7.5.2.4]
B1H29_05460  teichoic acid ABC transporter ATP-binding protein [KO:K09693] [EC:7.5.2.4]
B1H29_34395  ABC transporter substrate-binding protein [KO:K09813]
B1H29_34400  ABC transporter ATP-binding protein [KO:K09814] [EC:7.6.2.-]
B1H29_26130  ABC transporter [KO:K18233]
B1H29_26135  daunorubicin/doxorubicin resistance ABC transporter ATP-binding protein DrrA [KO:K18232]
B1H29_22660  ABC transporter permease [KO:K09811]
B1H29_22655  cell division ATP-binding protein FtsE [KO:K09812]
B1H29_25160  multidrug ABC transporter ATP-binding protein [KO:K18887]
B1H29_25155  multidrug ABC transporter ATP-binding protein [KO:K18888]
B1H29_01460  cytochrome bd biosynthesis ABC transporter ATP-binding protein [KO:K16013]
B1H29_18900  ABC transporter [KO:K16014]
B1H29_35580  tylosin resistance protein TlrC [KO:K18230]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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