KEGG   PATHWAY: src02010
Entry
src02010                    Pathway                                
Name
ABC transporters - Streptomyces rapamycinicus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
src02010  ABC transporters
src02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptomyces rapamycinicus [GN:src]
Gene
M271_42755  hypothetical protein [KO:K15553]
M271_45930  bicyclomycin resistance protein [KO:K15553]
M271_47390  nitrate ABC transporter substrate-binding protein [KO:K15553]
M271_13880  sulfate ABC transporter substrate-binding protein [KO:K15553]
M271_48360  hypothetical protein [KO:K15554]
M271_45940  ABC transporter permease [KO:K15554]
M271_13890  sulfate ABC transporter permease [KO:K15554]
M271_47385  ABC transporter permease [KO:K15554]
M271_02915  hypothetical protein [KO:K15555] [EC:7.6.2.14]
M271_45935  ATP-binding protein [KO:K15555] [EC:7.6.2.14]
M271_13885  sulfate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
M271_47380  mannosyltransferase [KO:K15555] [EC:7.6.2.14]
M271_24530  molybdate-binding protein [KO:K02020]
M271_24525  molybdate ABC transporter permease [KO:K02018]
M271_24520  ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
M271_12425  hypothetical protein [KO:K02012]
M271_12415  hypothetical protein [KO:K02011]
M271_12420  hypothetical protein [KO:K02010] [EC:7.2.2.7]
M271_15655  ABC transporter substrate-binding protein [KO:K02064]
M271_15650  iron ABC transporter permease [KO:K02063]
M271_15645  iron ABC transporter ATP-binding protein [KO:K02062] [EC:7.6.2.15]
M271_02025  hypothetical protein [KO:K11069]
M271_15575  ABC transporter substrate-binding protein [KO:K11069]
M271_02020  hypothetical protein [KO:K11070]
M271_15560  ABC transporter permease [KO:K11070]
M271_15565  ABC transporter permease [KO:K11071]
M271_15570  spermidine/putrescine ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
M271_02015  spermidine/putrescine ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
M271_28515  glycine betaine-binding lipoprotein [KO:K02002]
M271_38625  glycine/betaine ABC transporter permease [KO:K02001 K02002]
M271_28510  glycine/betaine ABC transporter permease [KO:K02001]
M271_28505  glycine/betaine ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
M271_38620  glycine/betaine ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
M271_29270  ABC transporter substrate-binding protein [KO:K05845]
M271_27175  amino acid ABC transporter substrate-binding protein [KO:K05845]
M271_29275  ABC transporter permease [KO:K05846]
M271_29280  ABC transporter permease [KO:K05846]
M271_27165  ABC transporter permease [KO:K05846]
M271_27170  ABC transporter permease [KO:K05846]
M271_29285  glycine/betaine ABC transporter ATPase [KO:K05847] [EC:7.6.2.9]
M271_27160  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
M271_27560  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
M271_35245  sugar ABC transporter substrate-binding protein [KO:K15770]
M271_35250  ABC transporter permease [KO:K15771]
M271_35255  ABC transporter permease [KO:K15772]
M271_29965  sugar ABC transporter substrate-binding protein [KO:K10117]
M271_07030  sugar ABC transporter substrate-binding protein [KO:K10117]
M271_33135  hypothetical protein [KO:K10117]
M271_01065  sugar ABC transporter substrate-binding protein [KO:K10117]
M271_29960  ABC transporter permease [KO:K10118]
M271_07025  sugar ABC transporter permease [KO:K10118]
M271_33130  sugar ABC transporter permease [KO:K10118]
M271_01060  ABC transporter [KO:K10118]
M271_29955  ABC transporter permease [KO:K10119]
M271_07020  sugar ABC transporter permease [KO:K10119]
M271_33125  sugar ABC transporter permease [KO:K10119]
M271_01055  ABC transporter permease [KO:K10119]
M271_07055  sugar ABC transporter substrate-binding protein [KO:K10227]
M271_07060  sugar ABC transporter permease [KO:K10228]
M271_07065  mannitol ABC transporter permease [KO:K10229]
M271_29845  sugar ABC transporter substrate-binding protein [KO:K10232]
M271_20705  ABC transporter substrate-binding protein [KO:K10232]
M271_38885  hypothetical protein [KO:K10232]
M271_29840  ABC transporter permease [KO:K10233]
M271_38890  hypothetical protein [KO:K10233]
M271_29835  sugar ABC transporter permease [KO:K10234]
M271_38895  hypothetical protein [KO:K10234]
M271_15520  hypothetical protein [KO:K17318]
M271_15515  sugar ABC transporter ATPase [KO:K17319]
M271_15510  ABC transporter permease [KO:K17320]
M271_47595  hypothetical protein [KO:K10236]
M271_47600  ABC transporter permease [KO:K10237]
M271_47605  sugar ABC transporter [KO:K10238]
M271_14395  ABC transporter substrate-binding protein [KO:K10200]
M271_14390  ABC transporter permease [KO:K10201]
M271_14385  sugar ABC transporter permease [KO:K10202]
M271_30955  sugar-binding protein [KO:K10240]
M271_41860  hypothetical protein [KO:K10240]
M271_30950  ABC transporter permease [KO:K10241]
M271_41855  hypothetical protein [KO:K10241]
M271_30945  sugar ABC transporter permease [KO:K10242]
M271_41850  sugar ABC transporter permease [KO:K10242]
M271_30080  ABC transporter substrate-binding protein [KO:K17329]
M271_17705  sugar transporter [KO:K17329]
M271_30085  sugar transporter [KO:K17330]
M271_17700  sugar ABC transporter permease [KO:K17330]
M271_30090  sugar ABC transporter permease [KO:K17331]
M271_17695  sugar ABC transporter permease [KO:K17331]
M271_32950  sugar-binding protein [KO:K17326]
M271_32945  ABC transporter [KO:K17327]
M271_32940  ABC transporter permease [KO:K17328]
M271_33300  sugar ABC transporter substrate-binding protein [KO:K10546]
M271_33290  ABC transporter permease [KO:K10547]
M271_33295  xylose ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
M271_28840  ABC transporter substrate-binding protein [KO:K07335]
M271_28850  sugar ABC transporter permease [KO:K23535]
M271_28855  ABC transporter permease [KO:K23536]
M271_28845  sugar ABC transporter ATPase [KO:K23537]
M271_01760  hypothetical protein [KO:K10439]
M271_42305  hypothetical protein [KO:K10439]
M271_44630  ABC transporter substrate-binding protein [KO:K10439]
M271_19425  sugar ABC transporter substrate-binding protein [KO:K10439]
M271_12645  sugar ABC transporter substrate-binding protein [KO:K10439]
M271_38410  ABC transporter substrate-binding protein [KO:K10439]
M271_31445  transporter [KO:K10439 K10440]
M271_42300  hypothetical protein [KO:K10440]
M271_12650  ABC transporter [KO:K10440]
M271_41795  hypothetical protein [KO:K10440]
M271_01770  hypothetical protein [KO:K10440]
M271_01765  ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
M271_42295  hypothetical protein [KO:K10441] [EC:7.5.2.7]
M271_12655  sugar ABC transporter ATPase [KO:K10441] [EC:7.5.2.7]
M271_31450  D-ribose transporter ATP binding protein [KO:K10441] [EC:7.5.2.7]
M271_41805  ABC transporter permease [KO:K10441] [EC:7.5.2.7]
M271_31435  ribose pyranase [KO:K06726] [EC:5.4.99.62]
M271_14375  ABC transporter substrate-binding protein [KO:K10543]
M271_12875  hypothetical protein [KO:K10543]
M271_14365  ABC transporter permease [KO:K10544]
M271_12865  ABC transporter permease [KO:K10544]
M271_14370  sugar ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
M271_12870  sugar ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
M271_42395  hypothetical protein [KO:K10552]
M271_42400  hypothetical protein [KO:K10553]
M271_42405  hypothetical protein [KO:K10554]
M271_09295  sugar ABC transporter substrate-binding protein [KO:K10559]
M271_09305  ATPase [KO:K10560]
M271_09300  ATPase [KO:K10561]
M271_09310  D-ribose transporter ATP binding protein [KO:K10562] [EC:7.5.2.-]
M271_22925  phosphate ABC transporter substrate-binding protein [KO:K02040]
M271_16580  phosphate ABC transporter substrate-binding protein [KO:K02040]
M271_22930  phosphate ABC transporter permease [KO:K02037]
M271_22935  phosphate ABC transporter permease [KO:K02038]
M271_22940  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
M271_15070  ABC transporter substrate-binding protein [KO:K10005]
M271_13455  ABC transporter substrate-binding protein [KO:K10005]
M271_15075  amino acid ABC transporter permease [KO:K10006]
M271_13450  amino acid ABC transporter permease [KO:K10006]
M271_15080  amino acid ABC transporter permease [KO:K10007]
M271_15065  ABC transporter [KO:K10008] [EC:7.4.2.1]
M271_13460  ABC transporter [KO:K10008] [EC:7.4.2.1]
M271_49380  hypothetical protein [KO:K01999]
M271_36395  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
M271_28195  hypothetical protein [KO:K01999]
M271_49385  hypothetical protein [KO:K01997 K01998]
M271_36390  ABC transporter permease [KO:K01997]
M271_36385  branched-chain amino acid ABC transporter permease [KO:K01998]
M271_49390  hypothetical protein [KO:K01995]
M271_36380  branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995]
M271_49395  hypothetical protein [KO:K01996]
M271_36375  amino acid ABC transporter ATPase [KO:K01996]
M271_10625  ABC transporter substrate-binding protein [KO:K02073]
M271_10630  ABC transporter permease [KO:K02072]
M271_10635  ABC transporter [KO:K02071]
M271_18360  peptide ABC transporter substrate-binding protein [KO:K15580]
M271_18435  peptide ABC transporter substrate-binding protein [KO:K15580]
M271_01395  hypothetical protein [KO:K15580]
M271_18365  ABC transporter permease [KO:K15581]
M271_18430  ABC transporter permease [KO:K15581]
M271_01400  hypothetical protein [KO:K15581]
M271_18370  peptide ABC transporter permease [KO:K15582]
M271_18425  peptide ABC transporter permease [KO:K15582]
M271_01405  hypothetical protein [KO:K15582]
M271_18375  dppD; peptide ABC transporter ATP-binding protein [KO:K15583]
M271_18420  dppD; peptide ABC transporter ATP-binding protein [KO:K15583]
M271_01410  hypothetical protein [KO:K15583]
M271_18380  peptide ABC transporter ATP-binding protein [KO:K10823]
M271_18415  peptide ABC transporter ATP-binding protein [KO:K10823]
M271_01415  hypothetical protein [KO:K10823]
M271_20095  ABC transporter substrate-binding protein [KO:K25287]
M271_34180  ABC transporter substrate-binding protein [KO:K25286]
M271_02275  iron siderophore-binding protein [KO:K25286]
M271_02290  iron ABC transporter permease [KO:K23186]
M271_27975  iron ABC transporter permease [KO:K23186]
M271_37385  iron ABC transporter permease [KO:K23186]
M271_02285  iron ABC transporter [KO:K23187]
M271_27970  iron ABC transporter [KO:K23187]
M271_37390  ABC transporter permease [KO:K23187]
M271_02280  iron-enterobactin transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
M271_27965  iron-enterobactin transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
M271_37395  ABC transporter [KO:K23188] [EC:7.2.2.17 7.2.2.-]
M271_32775  ABC transporter substrate-binding protein [KO:K09815]
M271_32765  ABC transporter [KO:K09816]
M271_32770  ABC transporter [KO:K09817] [EC:7.2.2.20]
M271_19830  cobalt ABC transporter [KO:K02007]
M271_19825  cobalt ABC transporter permease [KO:K02008]
M271_19820  cobalt ABC transporter ATP-binding protein [KO:K02006]
M271_32025  biotin biosynthesis protein BioY [KO:K03523]
M271_34025  cobalt ABC transporter permease [KO:K16785]
M271_11255  ABC transporter [KO:K09692]
M271_11250  techoic acid ABC transporter ATP-binding protein [KO:K09693] [EC:7.5.2.4]
M271_35110  ABC transporter [KO:K18233]
M271_35115  ABC transporter [KO:K18232]
M271_29890  cell division protein FtsX [KO:K09811]
M271_29885  cell division protein FtsE [KO:K09812]
M271_09940  hypothetical protein [KO:K14698] [EC:7.-.-.-]
M271_09935  hypothetical protein [KO:K14699] [EC:7.-.-.-]
M271_22775  multidrug ABC transporter ATP-binding protein [KO:K18887]
M271_22770  multidrug ABC transporter ATP-binding protein [KO:K18888]
M271_25455  hypothetical protein [KO:K16014]
M271_14935  ABC transporter ATP-binding protein [KO:K18230]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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