KEGG   PATHWAY: stv03430
Entry
stv03430                    Pathway                                
Name
Mismatch repair - Streptococcus sp. VT 162
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
stv03430  Mismatch repair
stv03430

Other DBs
GO: 0006298
Organism
Streptococcus sp. VT 162 [GN:stv]
Gene
V470_09135  DNA mismatch repair protein MutS [KO:K03555]
V470_07920  DNA mismatch repair protein MutS [KO:K07456]
V470_09120  DNA mismatch repair protein MutL [KO:K03572]
V470_04290  ATP-dependent DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
V470_03935  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
V470_03940  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
V470_07210  single-stranded DNA exonuclease [KO:K07462] [EC:3.1.-.-]
V470_02915  single-stranded DNA-binding protein [KO:K03111]
V470_01850  single-stranded DNA-binding protein [KO:K03111]
V470_08375  single-stranded DNA-binding protein [KO:K03111]
V470_05365  dnaE; DNA polymerase III DnaE [KO:K02337] [EC:2.7.7.7]
V470_00955  polC; DNA polymerase III PolC [KO:K03763] [EC:2.7.7.7]
V470_00050  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
V470_03815  DNA polymerase III subunits gamma and tau [KO:K02343] [EC:2.7.7.7]
V470_03585  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
V470_05760  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
V470_05135  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
V470_04420  ligA; NAD-dependent DNA ligase LigA [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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