KEGG   PATHWAY: sxm01100
Entry
sxm01100                    Pathway                                
Name
Metabolic pathways - Shewanella xiamenensis
Class
Pathway map
sxm01100  Metabolic pathways
sxm01100

Module
sxm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sxm01100]
sxm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sxm01100]
sxm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sxm01100]
sxm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sxm01100]
sxm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sxm01100]
sxm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sxm01100]
sxm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sxm01100]
sxm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sxm01100]
sxm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sxm01100]
sxm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sxm01100]
sxm_M00012  Glyoxylate cycle [PATH:sxm01100]
sxm_M00015  Proline biosynthesis, glutamate => proline [PATH:sxm01100]
sxm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sxm01100]
sxm_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sxm01100]
sxm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sxm01100]
sxm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sxm01100]
sxm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sxm01100]
sxm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sxm01100]
sxm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sxm01100]
sxm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sxm01100]
sxm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sxm01100]
sxm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sxm01100]
sxm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sxm01100]
sxm_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:sxm01100]
sxm_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:sxm01100]
sxm_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sxm01100]
sxm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sxm01100]
sxm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sxm01100]
sxm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sxm01100]
sxm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sxm01100]
sxm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sxm01100]
sxm_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sxm01100]
sxm_M00063  CMP-KDO biosynthesis [PATH:sxm01100]
sxm_M00083  Fatty acid biosynthesis, elongation [PATH:sxm01100]
sxm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sxm01100]
sxm_M00087  beta-Oxidation [PATH:sxm01100]
sxm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sxm01100]
sxm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sxm01100]
sxm_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sxm01100]
sxm_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sxm01100]
sxm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sxm01100]
sxm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sxm01100]
sxm_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sxm01100]
sxm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sxm01100]
sxm_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sxm01100]
sxm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sxm01100]
sxm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sxm01100]
sxm_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sxm01100]
sxm_M00140  C1-unit interconversion, prokaryotes [PATH:sxm01100]
sxm_M00149  Succinate dehydrogenase, prokaryotes [PATH:sxm01100]
sxm_M00151  Cytochrome bc1 complex respiratory unit [PATH:sxm01100]
sxm_M00155  Cytochrome c oxidase, prokaryotes [PATH:sxm01100]
sxm_M00156  Cytochrome c oxidase, cbb3-type [PATH:sxm01100]
sxm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sxm01100]
sxm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sxm01100]
sxm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sxm01100]
sxm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sxm01100]
sxm_M00417  Cytochrome o ubiquinol oxidase [PATH:sxm01100]
sxm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sxm01100]
sxm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sxm01100]
sxm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sxm01100]
sxm_M00621  Glycine cleavage system [PATH:sxm01100]
sxm_M00793  dTDP-L-rhamnose biosynthesis [PATH:sxm01100]
sxm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sxm01100]
sxm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sxm01100]
sxm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sxm01100]
sxm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sxm01100]
sxm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sxm01100]
sxm_M00970  Proline degradation, proline => glutamate [PATH:sxm01100]
Organism
Shewanella xiamenensis [GN:sxm]
Related
pathway
sxm00010  Glycolysis / Gluconeogenesis
sxm00020  Citrate cycle (TCA cycle)
sxm00030  Pentose phosphate pathway
sxm00040  Pentose and glucuronate interconversions
sxm00051  Fructose and mannose metabolism
sxm00052  Galactose metabolism
sxm00053  Ascorbate and aldarate metabolism
sxm00061  Fatty acid biosynthesis
sxm00071  Fatty acid degradation
sxm00130  Ubiquinone and other terpenoid-quinone biosynthesis
sxm00190  Oxidative phosphorylation
sxm00220  Arginine biosynthesis
sxm00230  Purine metabolism
sxm00240  Pyrimidine metabolism
sxm00250  Alanine, aspartate and glutamate metabolism
sxm00260  Glycine, serine and threonine metabolism
sxm00261  Monobactam biosynthesis
sxm00270  Cysteine and methionine metabolism
sxm00280  Valine, leucine and isoleucine degradation
sxm00290  Valine, leucine and isoleucine biosynthesis
sxm00300  Lysine biosynthesis
sxm00310  Lysine degradation
sxm00330  Arginine and proline metabolism
sxm00332  Carbapenem biosynthesis
sxm00340  Histidine metabolism
sxm00350  Tyrosine metabolism
sxm00360  Phenylalanine metabolism
sxm00361  Chlorocyclohexane and chlorobenzene degradation
sxm00362  Benzoate degradation
sxm00364  Fluorobenzoate degradation
sxm00380  Tryptophan metabolism
sxm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sxm00401  Novobiocin biosynthesis
sxm00410  beta-Alanine metabolism
sxm00430  Taurine and hypotaurine metabolism
sxm00450  Selenocompound metabolism
sxm00460  Cyanoamino acid metabolism
sxm00470  D-Amino acid metabolism
sxm00480  Glutathione metabolism
sxm00500  Starch and sucrose metabolism
sxm00511  Other glycan degradation
sxm00520  Amino sugar and nucleotide sugar metabolism
sxm00521  Streptomycin biosynthesis
sxm00523  Polyketide sugar unit biosynthesis
sxm00525  Acarbose and validamycin biosynthesis
sxm00540  Lipopolysaccharide biosynthesis
sxm00541  O-Antigen nucleotide sugar biosynthesis
sxm00542  O-Antigen repeat unit biosynthesis
sxm00543  Exopolysaccharide biosynthesis
sxm00550  Peptidoglycan biosynthesis
sxm00552  Teichoic acid biosynthesis
sxm00561  Glycerolipid metabolism
sxm00562  Inositol phosphate metabolism
sxm00564  Glycerophospholipid metabolism
sxm00565  Ether lipid metabolism
sxm00590  Arachidonic acid metabolism
sxm00592  alpha-Linolenic acid metabolism
sxm00600  Sphingolipid metabolism
sxm00620  Pyruvate metabolism
sxm00623  Toluene degradation
sxm00625  Chloroalkane and chloroalkene degradation
sxm00626  Naphthalene degradation
sxm00627  Aminobenzoate degradation
sxm00630  Glyoxylate and dicarboxylate metabolism
sxm00633  Nitrotoluene degradation
sxm00640  Propanoate metabolism
sxm00643  Styrene degradation
sxm00650  Butanoate metabolism
sxm00660  C5-Branched dibasic acid metabolism
sxm00670  One carbon pool by folate
sxm00680  Methane metabolism
sxm00710  Carbon fixation by Calvin cycle
sxm00720  Other carbon fixation pathways
sxm00730  Thiamine metabolism
sxm00740  Riboflavin metabolism
sxm00750  Vitamin B6 metabolism
sxm00760  Nicotinate and nicotinamide metabolism
sxm00770  Pantothenate and CoA biosynthesis
sxm00780  Biotin metabolism
sxm00785  Lipoic acid metabolism
sxm00790  Folate biosynthesis
sxm00860  Porphyrin metabolism
sxm00900  Terpenoid backbone biosynthesis
sxm00903  Limonene degradation
sxm00907  Pinene, camphor and geraniol degradation
sxm00910  Nitrogen metabolism
sxm00920  Sulfur metabolism
sxm00930  Caprolactam degradation
sxm00999  Biosynthesis of various plant secondary metabolites
sxm01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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