PATHWAY: tco02010 Help
Entry
Name
ABC transporters - Thermobacillus composti
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Thermobacillus composti [GN:
tco ]
Gene
Theco_1063 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [KO:K15553 ]
Theco_1058 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15554 ]
Theco_1059 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15554 ]
Theco_1608 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
Theco_3585 ABC-type spermidine/putrescine transport system, permease component II [KO:K11070 ]
Theco_3584 ABC-type spermidine/putrescine transport system, permease component I [KO:K11071 ]
Theco_1635 ABC-type proline/glycine betaine transport system, periplasmic component [KO:K02002 ]
Theco_1636 ABC-type proline/glycine betaine transport system, permease component [KO:K02001 ]
Theco_3516 ATPase component of ABC-type sugar transporter [KO:K10112 ] [EC:7.5.2.-]
Theco_3268 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_3228 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_0407 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1216 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1229 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1245 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_2957 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_3379 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_2836 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1542 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_0639 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1361 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1186 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_1370 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_3334 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_0922 ABC-type polysaccharide transport system, permease component [KO:K17319 ]
Theco_0857 ABC-type sugar transport system, ATPase component [KO:K10548 ] [EC:7.5.2.-]
Theco_0882 ABC-type sugar transport system, ATPase component [KO:K10548 ] [EC:7.5.2.-]
Theco_3081 putative ABC-type transport system, periplasmic component/surface lipoprotein [KO:K07335 ]
Theco_3079 ABC-type uncharacterized transport system, permease component [KO:K23535 ]
Theco_2594 putative ABC-type sugar transport system, permease component [KO:K10440 ]
Theco_0061 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters [KO:K23509 ]
Theco_0062 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters [KO:K23509 ]
Theco_2995 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters [KO:K10560 ]
Theco_2994 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters [KO:K10561 ]
Theco_2996 ABC-type sugar transport system, ATPase component [KO:K10562 ] [EC:7.5.2.-]
Theco_1275 permease component of ribose/xylose/arabinose/galactoside ABC-type transporters [KO:K17203 ]
Theco_2453 periplasmic component of amino acid ABC-type transporter/signal transduction system [KO:K16957 ]
Theco_2452 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [KO:K16958 ]
Theco_2451 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [KO:K16959 ]
Theco_3558 periplasmic component of amino acid ABC-type transporter/signal transduction system [KO:K16961 ]
Theco_3557 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [KO:K16962 ]
Theco_3556 ABC-type polar amino acid transport system, ATPase component [KO:K16963 ]
Theco_2755 periplasmic component of amino acid ABC-type transporter/signal transduction system [KO:K23059 ]
Theco_2754 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [KO:K17077 ]
Theco_2798 ABC-type branched-chain amino acid transport systems, ATPase component [KO:K01995 ]
Theco_2797 ABC-type branched-chain amino acid transport systems, ATPase component [KO:K01996 ]
Theco_0041 ABC-type oligopeptide transport system, periplasmic component [KO:K15580 ]
Theco_0042 ABC-type dipeptide/oligopeptide/nickel transport system, permease component [KO:K15581 ]
Theco_0043 ABC-type dipeptide/oligopeptide/nickel transport system, permease component [KO:K15582 ]
Theco_0044 oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K15583 ]
Theco_0045 oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K10823 ]
Theco_2003 ABC-type metal ion transport system, periplasmic component/surface adhesin [KO:K09815 ]
Theco_2985 ABC-type metal ion transport system, periplasmic component/surface adhesin [KO:K11707 ]
Theco_0445 lantibiotic protection ABC transporter permease subunit, MutE/EpiE family [KO:K20491 ]
Theco_0446 lantibiotic protection ABC transporter permease subunit, MutG family [KO:K20492 ]
Theco_0444 gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit [KO:K20490 ]
Theco_2278 ABC-type antimicrobial peptide transport system, ATPase component [KO:K09810 ] [EC:7.6.2.-]
Theco_3413 ABC-type antimicrobial peptide transport system, permease component [KO:K19084 ]
Theco_3412 ABC-type antimicrobial peptide transport system, ATPase component [KO:K19083 ]
Theco_0037 ABC-type transport system involved in multi-copper enzyme maturation, permease component [KO:K19341 ]
Theco_2813 ABC-type multidrug transport system, ATPase and permease component [KO:K14698 ] [EC:7.-.-.-]
Theco_2812 ABC-type multidrug transport system, ATPase and permease component [KO:K14699 ] [EC:7.-.-.-]
Theco_3951 ABC-type multidrug transport system, ATPase and permease component [KO:K18889 ]
Theco_3274 ABC-type multidrug transport system, ATPase and permease component [KO:K18889 ]
Theco_1785 ABC-type multidrug transport system, ATPase and permease component [KO:K18889 ]
Theco_3273 ABC-type multidrug transport system, ATPase and permease component [KO:K18890 ]
Theco_3950 ABC-type multidrug transport system, ATPase and permease component [KO:K18890 ]
Theco_1784 ABC-type multidrug transport system, ATPase and permease component [KO:K18890 ]
Theco_2012 ABC-type multidrug transport system, ATPase and permease component [KO:K18887 ]
Theco_3943 ABC-type multidrug transport system, ATPase and permease component [KO:K18887 ]
Theco_2011 ABC-type multidrug transport system, ATPase and permease component [KO:K18888 ]
Theco_0893 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC [KO:K16012 ]
Theco_2889 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydC [KO:K16012 ]
Theco_0894 ATPase and permease component of ABC-type transporter involved in cytochrome bd biosynthesis [KO:K16013 ]
Theco_2890 cysteine export CydDC family ABC transporter permease subunit/ATP-binding protein CydD [KO:K16013 ]
Theco_0522 ATPase component of ABC transporters with duplicated ATPase domain [KO:K19349 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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