KEGG   PATHWAY: tgu03022
Entry
tgu03022                    Pathway                                
Name
Basal transcription factors - Taeniopygia guttata (zebra finch)
Class
Genetic Information Processing; Transcription
Pathway map
tgu03022  Basal transcription factors
tgu03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Taeniopygia guttata (zebra finch) [GN:tgu]
Gene
105759082  GTF2A1L; TFIIA-alpha and beta-like factor isoform X1 [KO:K03122]
100219035  GTF2A1; transcription initiation factor IIA subunit 1 [KO:K03122]
100190631  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
100220653  GTF2B; transcription initiation factor IIB isoform X3 [KO:K03124]
100228722  TBPL2; TATA box-binding protein-like protein 2 [KO:K03120]
100227951  TBP; TATA-box-binding protein [KO:K03120]
100232377  TBPL1; TATA box-binding protein-like protein 1 isoform X1 [KO:K03120]
100221321  TAF1; transcription initiation factor TFIID subunit 1 isoform X3 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
100225920  TAF2; transcription initiation factor TFIID subunit 2 isoform X3 [KO:K03128]
100228159  TAF7L; transcription initiation factor TFIID subunit 7-like [KO:K03132]
100225581  TAF8; transcription initiation factor TFIID subunit 8 isoform X2 [KO:K14649]
101233630  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
100190319  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
100224759  TAF5; transcription initiation factor TFIID subunit 5 [KO:K03130]
100222154  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
100224103  TAF4B; transcription initiation factor TFIID subunit 4B isoform X1 [KO:K03129]
100219067  TAF4; transcription initiation factor TFIID subunit 4 [KO:K03129]
101233672  transcription initiation factor TFIID subunit 4 [KO:K03129]
100217940  TAF12; transcription initiation factor TFIID subunit 12 isoform X2 [KO:K03126]
101233986  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
115492648  TAF6; transcription initiation factor TFIID subunit 6 [KO:K03131]
100231294  TAF9B; transcription initiation factor TFIID subunit 9B [KO:K14535]
100228800  TAF11; transcription initiation factor TFIID subunit 11 [KO:K03135]
100190181  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
100219424  TAF15; TATA-binding protein-associated factor 2N isoform X1 [KO:K14651]
100217845  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
115494966  general transcription factor IIE subunit 1 [KO:K03136]
100231029  GTF2E2; transcription initiation factor IIE subunit beta [KO:K03137]
100221487  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
100232545  GTF2H1; general transcription factor IIH subunit 1 isoform X1 [KO:K03141]
100217858  general transcription factor IIH subunit 2 isoform X1 [KO:K03142]
100227677  GTF2H3; general transcription factor IIH subunit 3 [KO:K03143]
100232287  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
100222149  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
100230524  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
100231586  MNAT1; CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
100231331  CCNH; cyclin-H isoform X1 [KO:K06634]
100227162  GTF2I; general transcription factor II-I isoform X1 [KO:K03121]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
tgu03020  RNA polymerase
tgu03420  Nucleotide excision repair
KO pathway
ko03022   
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