KEGG   PATHWAY: trg03030
Entry
trg03030                    Pathway                                
Name
DNA replication - Talaromyces rugulosus
Description
A complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (DnaB or MCM complex) precedes the DNA synthetic machinery and unwinds the duplex parental DNA in cooperation with the SSB or RPA. On the leading strand, replication occurs continuously in a 5 to 3 direction, whereas on the lagging strand, DNA replication occurs discontinuously by synthesis and joining of short Okazaki fragments. In prokaryotes, the leading strand replication apparatus consists of a DNA polymerase (pol III core), a sliding clamp (beta), and a clamp loader (gamma delta complex). The DNA primase (DnaG) is needed to form RNA primers. Normally, during replication of the lagging-strand DNA template, an RNA primer is removed either by an RNase H or by the 5 to 3 exonuclease activity of DNA pol I, and the DNA ligase joins the Okazaki fragments. In eukaryotes, three DNA polymerases (alpha, delta, and epsilon) have been identified. DNA primase forms a permanent complex with DNA polymerase alpha. PCNA and RFC function as a clamp and a clamp loader. FEN 1 and RNase H1 remove the RNA from the Okazaki fragments and DNA ligase I joins the DNA.
Class
Genetic Information Processing; Replication and repair
Pathway map
trg03030  DNA replication
trg03030

Organism
Talaromyces rugulosus [GN:trg]
Gene
TRUGW13939_11463  uncharacterized protein [KO:K03469] [EC:3.1.26.4]
TRUGW13939_06091  uncharacterized protein [KO:K07466]
TRUGW13939_00467  uncharacterized protein [KO:K04802]
TRUGW13939_02923  uncharacterized protein [KO:K10742] [EC:5.6.2.3 3.1.-.-]
TRUGW13939_11227  uncharacterized protein [KO:K04799] [EC:3.1.-.-]
TRUGW13939_06294  uncharacterized protein [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
TRUGW13939_07795  uncharacterized protein [KO:K02320] [EC:2.7.7.7]
TRUGW13939_05529  uncharacterized protein [KO:K02321]
TRUGW13939_10119  uncharacterized protein [KO:K02684] [EC:2.7.7.102]
TRUGW13939_00405  uncharacterized protein [KO:K02685]
TRUGW13939_04992  uncharacterized protein [KO:K02327] [EC:2.7.7.7]
TRUGW13939_09888  uncharacterized protein [KO:K02328]
TRUGW13939_05244  uncharacterized protein [KO:K03505]
TRUGW13939_03615  uncharacterized protein [KO:K02324] [EC:2.7.7.7]
TRUGW13939_06079  uncharacterized protein [KO:K02325] [EC:2.7.7.7]
TRUGW13939_04113  uncharacterized protein [KO:K02540] [EC:5.6.2.3]
TRUGW13939_00547  uncharacterized protein [KO:K02541] [EC:5.6.2.3]
TRUGW13939_06034  uncharacterized protein [KO:K02212] [EC:5.6.2.3]
TRUGW13939_10827  uncharacterized protein [KO:K02209] [EC:5.6.2.3]
TRUGW13939_05484  uncharacterized protein [KO:K02542] [EC:5.6.2.3]
TRUGW13939_09605  mini-chromosome maintenance complex protein 7 [KO:K02210] [EC:5.6.2.3]
TRUGW13939_00138  uncharacterized protein [KO:K10739]
TRUGW13939_07037  uncharacterized protein [KO:K10754]
TRUGW13939_04562  uncharacterized protein [KO:K10755]
TRUGW13939_02617  uncharacterized protein [KO:K10756]
TRUGW13939_07039  uncharacterized protein [KO:K10756]
TRUGW13939_11503  uncharacterized protein [KO:K10743] [EC:3.1.26.4]
Reference
PMID:8087839
  Authors
Stillman B.
  Title
Smart machines at the DNA replication fork.
  Journal
Cell 78:725-8 (1994)
DOI:10.1016/S0092-8674(94)90362-X
Reference
PMID:9759502
  Authors
Waga S, Stillman B.
  Title
The DNA replication fork in eukaryotic cells.
  Journal
Annu Rev Biochem 67:721-51 (1998)
DOI:10.1146/annurev.biochem.67.1.721
KO pathway
ko03030   
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