Paraburkholderia sp. 22B1P: PBP221_81320
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Entry
PBP221_81320 CDS
T10680
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pazz Paraburkholderia sp. 22B1P
Pathway
pazz01501
beta-Lactam resistance
pazz02024
Quorum sensing
Module
pazz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pazz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBP221_81320
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBP221_81320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pazz02000
]
PBP221_81320
01504 Antimicrobial resistance genes [BR:
pazz01504
]
PBP221_81320
Transporters [BR:
pazz02000
]
Other transporters
Pores ion channels [TC:
1
]
PBP221_81320
Antimicrobial resistance genes [BR:
pazz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBP221_81320
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PBP221_81320
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PBP221_81320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
GntR
HTH_11
CsoSCA_N
DIMCO_N
Tox-REase-5
Motif
Other DBs
NCBI-ProteinID:
BEU27992
LinkDB
All DBs
Position
p22B1P1:2467348..2468808
Genome browser
AA seq
486 aa
AA seq
DB search
MFNASASLVRKSVVIAVASALTACSTLPNYSQPQTAVPDHFASVPQPSAGWTVATPADAQ
SRGPWWTLYGDDELNHLEAQVDVSNQTVRKAVAQLEAARAMVDYQRAGYSPTVTAGTSAQ
RFRTSQNVVHRGLAGHTVPDFSVGVAASWEPDLFGRVKDATVNARDNAQASEADLQSVRL
AVAADLATDYFDLRSLDRQKKLLDDSVTAYSAALRILQQQLNDGAIDASAVAQAQTQLES
TRTQDSDIDVQRAQLEHAIATLIGQPASSFSLPPKVETIALPQIPAGVPSQLLERRPDIA
AAERRVAAANAQIGQARAAFYPNLTLSATAGLESTFFAPWLTASSLFWSLGSQIAGTLFD
GGRRSAALKGANAQYDGTVADYRQTVLVAFQQVEDQLSSLDTLANEADSQQRATKAADLS
LKLTSNRFQAGAVNYLDVVTAQTIALSNERTAEQIDARRIDASVQLLKALGGGWDRASLT
DAHATD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgcaagtgcgtcgctggttcgcaagtcggtcgttatcgccgtcgcaagcgcg
ctgaccgcgtgttcgacgctgccgaattattcgcagccgcaaacggctgtgcccgatcat
ttcgcaagcgtgccgcaaccctcggcgggctggacggtcgccacgcccgccgacgcgcag
tcgcgcggcccatggtggacgctctacggcgacgacgagctgaaccatctcgaagcacag
gtcgacgtgtcgaaccagaccgtgcgcaaggccgtcgcgcaactggaagcggcgcgcgcg
atggtcgattatcagcgcgccggttactcgcccactgtgacggcgggaacgtcggcgcag
cgttttcgaacctcgcagaacgtcgtgcaccgcggcctggcgggccataccgtgcccgat
ttttcggtgggcgttgcggcgagctgggagcccgatctgttcggtcgtgtcaaggatgcg
acggtcaacgcgcgcgataacgcgcaggccagcgaagcggatctgcaatcggtgcgcctt
gccgtcgccgccgatctcgccaccgactatttcgatctgcgctcgctcgaccggcaaaag
aagctgctcgacgattccgtcaccgcgtactcggccgcgctgcgtatcctgcaacagcag
ttgaacgacggcgcaatcgatgcgtcggccgtcgcgcaggcgcaaacgcaactggaaagc
acgcgcacgcaggacagcgatatcgacgtgcagcgcgcgcagctcgagcatgccatcgcg
acgctgatcggccagcccgcttcgtcgttttcgttgccgccgaaggtcgaaaccatcgcg
ctgccgcagattccggcgggcgtgccgtcacaattgctggagcgccgtcccgacatcgcc
gccgccgaacggcgcgtggccgcggcgaatgcgcagatcggccaggcgcgcgcggcgttc
tatccgaatctcaccctgtcggcgacagcggggctcgaaagcacgttctttgcgccgtgg
ctcactgcgtcgagtctgttctggtcgcttggctcgcagatcgcgggcacgctgttcgac
ggcggacgccgcagcgcggcgctgaagggcgcgaacgcgcagtatgacggtacggtcgcg
gattatcggcagacggtgctggtcgcgttccagcaggtcgaagatcaactgtcgtcgctc
gatacgctcgcgaacgaggccgacagccagcaacgcgcgacgaaagccgcggacctctcg
ctgaaactgacgtccaaccgctttcaggcaggcgcagtcaattacctcgatgtcgtcacc
gcgcagaccatcgcgctatccaatgaacgtacggccgagcagatcgacgcacgacgtatc
gacgcgagcgtgcaactgctgaaggcgctcggcggcggctgggatcgcgcgtcgctgacg
gatgcgcacgcaacggattga
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