Pseudomonas brassicacearum DF41: CD58_02660
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Entry
CD58_02660 CDS
T03174
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc01501
beta-Lactam resistance
pbc01503
Cationic antimicrobial peptide (CAMP) resistance
pbc02020
Two-component system
pbc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CD58_02660
09132 Signal transduction
02020 Two-component system
CD58_02660
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD58_02660
01503 Cationic antimicrobial peptide (CAMP) resistance
CD58_02660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_02660
02044 Secretion system [BR:
pbc02044
]
CD58_02660
01504 Antimicrobial resistance genes [BR:
pbc01504
]
CD58_02660
Transporters [BR:
pbc02000
]
Other transporters
Pores ion channels [TC:
1
]
CD58_02660
Secretion system [BR:
pbc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CD58_02660
RTX toxin transporter
CD58_02660
Multiple protein transporter
CD58_02660
RaxAB-RaxC type I secretion system protein
CD58_02660
Antimicrobial resistance genes [BR:
pbc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CD58_02660
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CD58_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHL31862
LinkDB
All DBs
Position
complement(595834..597273)
Genome browser
AA seq
479 aa
AA seq
DB search
MLRKLSLALAVSCAFNGMAWAAEAPLTTKTDLVSVYQEAVDNNADLAAARAQYGAQKEVV
PQARAGLLPNLSAGADLNNTRTELDQPALTATRSATVYQATLSQPIFRADRWFQLQAAKS
VNEQASLQLSATEQNMILQSAESYFNVLRSQDNLASTKAEEAALKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRILAQRQVDDAFEALITLTNRQYNSLQGIVHTLPILPPAPND
AKAWVDTAAKQNLNLLASNYAVDAAEDTLRQRKAGHAPTLDAIAQYKKGDNDGLGFTNPS
PTGQRYGSDAEQRTIGLQLSIPIYSGGLTSSQVRESYSQLTQTEQQREGLRRQVVENTRN
LHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNA
RYDYILDNLRLKQAAGTLSPADLQDLSRYLKPDYNPDRDFLPPDLAQAAAQQLRSRPAQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactttcactggccctcgccgtgtcttgtgcgttcaatggaatggcctgg
gctgccgaagcgcccctgaccaccaaaaccgatctggtgagcgtgtaccaggaggccgtg
gacaacaacgccgacctggccgccgcccgcgctcaatacggcgcccagaaggaagtggta
ccccaggcgcgcgccgggttgttgcccaacctttcggccggggccgacctgaacaacacc
cgtaccgagctcgaccagccggcgctgaccgccacccgcagcgccacggtctaccaagcc
acgctgtcccaaccgattttccgtgccgaccgctggttccaactccaggcggcaaagtcc
gtcaacgaacaagcctcgctgcaactgtcggccaccgaacagaacatgatcctgcaaagc
gccgagagctatttcaatgtgctgcgcagccaggacaacctggcctcgaccaaggctgag
gaagcggcgctcaagcgccagctcgaccagtccaacgagcgcttcgacgtgggcctgtcg
gacaagaccgacgtgctgcaatcccaggccagctacgatacggcacgggccaaccggatc
ctcgcccagcgccaggtcgatgacgccttcgaagccttgatcaccctgaccaaccgccag
tacaactcgctccagggcatcgtccacaccctgccgatcctgccgccggcaccgaacgac
gccaaggcctgggtcgacacggcagccaagcagaacctgaacctgctggccagcaactac
gccgttgatgccgccgaagacaccctgcgccaacgcaaggctggtcatgcgccgaccctc
gatgcgatcgcccagtacaaaaaaggcgacaacgacggcctcggcttcaccaacccgagc
cctaccggacagcgctatggcagtgatgccgagcaacgtaccatcggtttgcagttgagt
atcccgatctatagcggcggcctgaccagctcccaggtgcgcgagtcctactcgcagctc
acccagaccgaacagcagcgcgaaggcctgcgccggcaggtggtggaaaacacccgtaac
ctgcaccgcgcggtgaacaccgacgtggaacaggtccaggccaggcgccagtcgatcatc
tccaaccagagcgcggtggaagccacggaaatcggctaccaggtgggcactcgcaacatc
gtcgatgtgctcgatgcccagcgccagctgtacacctcggtgcgcaactacaacaacgcc
cgctacgactacatcctcgacaacctgcggctcaagcaggccgccgggacgttgagcccg
gcggatctgcaggatctgtcacgttatctcaagcctgactacaacccggaccgggacttc
ctgccaccggacctggcccaggcagcggcgcagcagttgcgctcgcggccggcgcaataa
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