Pseudomonas brassicacearum DF41: CD58_16220
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Entry
CD58_16220 CDS
T03174
Name
(GenBank) multidrug transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pbc
Pseudomonas brassicacearum DF41
Pathway
pbc01501
beta-Lactam resistance
pbc02024
Quorum sensing
Module
pbc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pbc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CD58_16220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CD58_16220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbc02000
]
CD58_16220
01504 Antimicrobial resistance genes [BR:
pbc01504
]
CD58_16220
Transporters [BR:
pbc02000
]
Other transporters
Pores ion channels [TC:
1
]
CD58_16220
Antimicrobial resistance genes [BR:
pbc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CD58_16220
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CD58_16220
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CD58_16220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHL34345
LinkDB
All DBs
Position
3710599..3712023
Genome browser
AA seq
474 aa
AA seq
DB search
MHKLLSPLAVAAFMLGGCSLIPDYQRPDAPIAGQYPQTSAYAPALSGPIAAEQGWRDLFQ
DPALQQLIESALVNNRDLRVAALNVEAYQAQYRIQRADLYPAISANGTGSRQRLPASLTG
TGEPAISSSYSATLGISAYELDLFGRIRSLSEEASLVYLSSEEARRSTQLSLVASVASAY
LTWRADQELLTLTRDTLQSYEESLRLTERSNQVGTASALSLSQSRTSVESAKASLAKFQR
QVAQDLNSLTLLVGTSVADDLPARPLASDLLIEVPAGLPSDLLQRRPDILEAEYLLQSAN
ANIGAARAAFFPSISLTANAGSSSSELSGLFKGGSGSWVFQPQINLPIFNAGSLRASLNY
SKIQKDIRVSQYEKAIQTAFQEVSDGLAARKTYKDQLLAQHDLVQANQDYYRLAERRYRI
GVDSSLTFLDAQRSLFSARQTLIADRLSQLLAEVSLYKALGGGWVERTNKVTVR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcataaactcttgagccccctggcggtcgcggcattcatgctcggcggttgttcgctt
atcccggactaccagcgtcccgatgcaccgatagccgggcaatacccgcagacgtccgct
tatgccccggccctgtcggggcctatcgcggctgaacagggttggcgtgatctgttccag
gatccagcgctgcagcaactcatcgaaagtgcgctggtcaacaaccgcgacttgcgggtg
gcggccctgaacgtcgaggcttaccaggcgcaatatcggattcagcgggcggatctctac
ccggcgatcagtgccaatggcacaggttcgcgccaacggttgccggccagcctgacggga
accggcgaacccgcgattagcagctcgtattcggccacactgggcatcagcgcctatgaa
ctggacctgttcgggcgaatacgcagcctcagtgaggaggcgtcgctggtctatctgtcc
agcgaagaagcccgtcgcagcacccagttgagcctggtggccagcgtggccagcgcctac
ctgacctggcgtgccgatcaggagctgctgacgctgacccgcgacacgctccagtcctac
gaggaaagcctgcgcctgaccgaacgcagcaatcaggtcggcaccgcctcggccctgagc
ctgagccaatcgcgaacctcggtggaaagcgccaaggccagcctggccaagtttcaacgc
caggttgcccaggacctcaacagcctcacgttactggtgggcacgtcggtcgcggatgac
ctgcccgcccggccgctggcatccgacctgctcatcgaagtaccggccggactgccttcg
gacctgttgcagcggcggccggacattcttgaggccgagtacctgttgcaatcggccaat
gccaacatcggcgcggcacgcgccgcgttcttcccgagcatcagcctgaccgccaatgcc
ggcagttcgagcagcgaactgtccgggctgttcaagggtggttcgggcagttgggtgttt
caaccacagatcaatttgccaattttcaatgccggcagccttcgggcgagcctgaactat
tcgaaaatccagaaagacatccgtgtgtcgcaatacgaaaaagcaatccagaccgccttc
caggaagtttccgatggcttggcggcacgcaagacctataaggaccaactgctcgcccag
catgacctggtacaggccaaccaggactactaccgcctggcggagcggcgctatcggatt
ggcgtggacagcagcctgacgttccttgatgcccaacgctcgctgttcagcgcccgacaa
accctgatcgccgaccggctgtcgcaactgctcgccgaggtcagtctgtacaaggctctg
ggcgggggttgggtagaacgcacaaacaaagtgactgtgaggtga
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