Desulfobaculum bizertense: LWC08_06560
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Entry
LWC08_06560 CDS
T07819
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pbiz
Desulfobaculum bizertense
Pathway
pbiz01501
beta-Lactam resistance
pbiz01503
Cationic antimicrobial peptide (CAMP) resistance
pbiz02020
Two-component system
pbiz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbiz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LWC08_06560
09132 Signal transduction
02020 Two-component system
LWC08_06560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LWC08_06560
01503 Cationic antimicrobial peptide (CAMP) resistance
LWC08_06560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbiz02000
]
LWC08_06560
02044 Secretion system [BR:
pbiz02044
]
LWC08_06560
01504 Antimicrobial resistance genes [BR:
pbiz01504
]
LWC08_06560
Transporters [BR:
pbiz02000
]
Other transporters
Pores ion channels [TC:
1
]
LWC08_06560
Secretion system [BR:
pbiz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LWC08_06560
RTX toxin transporter
LWC08_06560
Multiple protein transporter
LWC08_06560
RaxAB-RaxC type I secretion system protein
LWC08_06560
Antimicrobial resistance genes [BR:
pbiz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LWC08_06560
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LWC08_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UIJ39229
LinkDB
All DBs
Position
complement(1396070..1398466)
Genome browser
AA seq
798 aa
AA seq
DB search
MQSRKRSRSKRLFVMLVLPVLISVCLACVTQKSAFAARTVVVGVLTDGPSPFAERFLQSI
QQETRALGEDAFRIQWKLAPAFDAGWDASRTRKTLRAALRDPQVDIVMTLGALQAQSAAT
AAFPFSKPVLTGPLFDEQVLKKLPYKNDRSLKANFCPVVVENRVRRDITAFKDLVPFSRL
HVLIQKEFVGSFVGLDRLVQDYCALFGIGIEFIPVGQNLDDVMPRLSSDVEAVYVTPLMR
VPENALHILVEQLKARAIPSWSFLGKEEVEAGILAGRTSYWGAHLSRRMALNIHDIAAGR
SARSLPVLLSEEDQLFLNMNTARDIGFSPKYAALLTANLVGQADDDLLGTPLDLAEAMRI
AGQQNVSLREDRAKYEEVQEDRRLARSQLLPQLGASARYIQIDQDISRASQGLIPWDRTG
AGLAVSQMIFDDAVVSRFRAARRNEHAEKAFQASKRLDVVQQAGVRYLQLLSAQALLSIE
RDNYQLIVRNLDMARVRRETGVSGPEEVYRWEAALAESRARVIQRRADIQAAQYALNQAL
NQPLTTQWQLKDMSADQARRAFFDVKAETIGSSLSQLARLSDRAASLSAERPSLKGLELL
VEAQDIVASQKARQRFVPSLKAGAMYTHEIDKHQIDGALRRNDPDDLEDVWAFGVTAELP
LFAGGALSHEQDRANAVLQQVKARRERLVQLAAQQVRTVISRMSQSYPNIELSALAADRA
RKNLGVVRDKYARGAVSILELLDAQNQSLVQKQAAAIAVYEYVRDVLDFQRALGWFEIDA
TPQQKQEFLSRLGAVKKE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtcgaaaaagatcgaggagcaaaagactgttcgtcatgcttgtgctccctgtg
ttgataagtgtttgtctcgcctgtgtgacccaaaaatctgctttcgcagcccgaacagtt
gttgtcggggtacttactgatggtccgtcaccctttgctgaacgtttcttgcagagcatt
cagcaggaaacccgtgcgctcggtgaagatgcgtttcgcattcagtggaagcttgctccg
gcatttgatgcaggatgggatgcctccagaactcgaaagacactccgcgctgcactccga
gatccgcaggtcgatattgtcatgacgctgggggcgttgcaggcacagtcagcggcaacc
gcggcatttcccttttccaagcccgtgctcacgggacctctttttgacgagcaagtcctg
aaaaaactcccctataaaaatgataggtcactcaaggcaaatttttgtcctgtcgttgtt
gaaaaccgtgtgcggcgagacattacggcgttcaaggatctcgtgccgttttctcggctc
catgtgttgattcaaaaagaatttgtggggagttttgtcgggctggatcgccttgttcag
gactattgcgcgctttttggaattggcattgagttcatcccggtggggcagaatcttgat
gatgtcatgccccggctgagttctgatgtggaagccgtgtatgtaactccccttatgcgc
gtgccagaaaatgcgctgcatattcttgtggagcagctcaaggcccgtgcgattccttcg
tggtcttttctggggaaggaagaagtcgaggcgggcattttggcaggccgaaccagctac
tggggggcacacctgagccgacggatggccctcaatatccatgacatagcagcagggcgt
tctgcccggtcccttcccgtactgctttctgaagaagaccagctttttttgaatatgaat
actgctcgcgatattggcttttcaccaaaatacgccgcgcttcttacggcaaacctcgtg
ggacaggcggacgatgatctgcttggtacgcctttggaccttgctgaggccatgcgcatc
gccggacagcagaatgtgtcgttgcgggaagaccgggccaaatatgaggaagtgcaggaa
gatagacgtctggctcgcagtcagcttttgccccagcttggggcctcggcgcggtacatt
cagatagatcaggatatatcacgggcaagtcaggggcttattccgtgggacagaacaggt
gctggccttgctgtgtctcaaatgatttttgatgacgctgtggtgagccgttttcgtgct
gcacgtcggaacgagcatgcagaaaaggcatttcaggcttcgaagcgccttgatgtggtg
cagcaggctggggttcgctatctccagcttctttcggcgcaggcgcttttgtccattgag
cgcgataactatcagctgattgtgcgcaatctggatatggcccgcgtgcgacgagaaact
ggtgtttctggcccggaagaagtgtatcgctgggaggctgcgcttgcggagagcagggcg
cgggttattcagcggcgggcagatattcaggccgcacagtatgccttgaatcaggctctg
aaccagccgcttacgacgcagtggcagctgaaggatatgagtgcagatcaggctcggcgg
gctttttttgatgtaaaggctgaaacaattggcagttcgttatcacagcttgcccggctt
tcggaccgggctgcaagtctgtctgcggagcggccttcccttaaaggtctcgaacttttg
gttgaggcgcaggatattgttgcctcgcagaaggcccggcaacgctttgtcccgtcgctc
aaggccggggcaatgtatacacacgaaattgataaacatcagattgatggtgccttgcgg
cgtaatgatccagatgatcttgaggatgtctgggcctttggcgttacagcagagctgcca
ctctttgcgggtggggcgctgagccatgaacaggacagggccaatgctgttttgcagcag
gtcaaggcgcggcgagaacgccttgtccagcttgcggcgcagcaggtgcgaaccgtgata
agtcgcatgagtcagtcatatcccaatattgagctgtctgcccttgctgcggaccgtgcc
cgaaagaatcttggggtggtgcgtgacaagtatgcgcgtggagctgtaagcattctggag
cttctggatgcgcagaaccagtcgcttgtccaaaagcaggctgcggccattgctgtctat
gagtatgtgcgggacgttttggatttccagcgtgctcttggctggtttgagattgatgcc
accccgcagcaaaaacaggaatttttgtcacggctgggagctgtgaagaaggagtaa
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