Pseudomonas bubulae: V6B39_20480
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Entry
V6B39_20480 CDS
T10711
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pbub Pseudomonas bubulae
Pathway
pbub01501
beta-Lactam resistance
pbub02024
Quorum sensing
Module
pbub_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6B39_20480
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6B39_20480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbub02000
]
V6B39_20480
01504 Antimicrobial resistance genes [BR:
pbub01504
]
V6B39_20480
Transporters [BR:
pbub02000
]
Other transporters
Pores ion channels [TC:
1
]
V6B39_20480
Antimicrobial resistance genes [BR:
pbub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6B39_20480
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
V6B39_20480
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
V6B39_20480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
ACTH_domain
Motif
Other DBs
NCBI-ProteinID:
WWR37313
LinkDB
All DBs
Position
complement(4509491..4510864)
Genome browser
AA seq
457 aa
AA seq
DB search
MSHFRWSLLAVFALLGGCINLAAEYERPQASVAEQWLPGTATPKGQVAADIQWQQFFTDP
RLAQLQTLALANNRDLRVASLNIEKAQAQYRIQRAASFPGIDASVSGSSSRANSSTSHSY
SAELGLSSYEVDVFGRVKNLQDEALQSYLALTETRRSTQISMVAEVGTAWLTLAADNERL
KLAQETLTSQQSTYELTQRSHGLGGSSGLAVSEAQTTVESARVDVAEYASQVLQDQNALR
LLVGSDIPASLLPGDSLESAAMLVQVPAELPSTLLQRRPDVLAAEHSLMSANIDIGAARA
AFFPSITLTAGAGSASTSLSSLFKAGSGAWSFAPSISLPIFDAGSNRATLDSAKVEREIQ
AQTYQLTLQTAFKEVADALAVRSTLDQRLSAQQALTEASRKSYELSDALYRSGSQSFLEA
LVSQRSLYSAEQDLITLRLAEQSNRVTLYKVLGGGWN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtcactttcgttggtcgctgctggccgttttcgcactgctgggcggctgcatcaat
ctggcggctgagtacgagcgcccgcaagcctcggtggccgaacaatggctgccgggcacc
gctacgcccaaagggcaggtggcggcggacattcaatggcagcagtttttcaccgacccg
cgtctggcgcagttgcagaccctggccttggccaataaccgcgacctgcgggtggccagc
ctgaatatcgaaaaagcgcaggcgcaataccgcatccagcgtgccgcctcgtttccgggg
atcgacgccagcgtcagtggcagttccagtcgggccaacagcagcaccagccacagctac
agtgccgaactggggttgagcagctacgaagtggacgtgttcgggcgagtcaaaaacctt
caggacgaagcgctgcagtcctatctggcgctgaccgaaacccgccgcagcactcagatc
agcatggtcgccgaagtgggcaccgcgtggctgacgttggcggcggacaacgagcgcctg
aaattggcacaagagacgctgaccagccagcagtccacctacgaactgacccagcgcagc
catggtttgggtggttcatcggggctggcggtctctgaggcgcaaaccaccgtggaatcg
gcgcgggttgatgtggccgaatacgccagtcaggtgctgcaagatcagaatgcgttgcgt
ctgctggtgggcagcgacatcccggccagcctgctgccgggcgacagcctggaatcggcg
gcgatgctggtgcaagtgccagccgagttgccgtccaccttgttgcagcgtcgcccggac
gtactggccgctgaacatagcttgatgtcagccaacatcgacattggcgcggcgcgggcg
gcgttcttccccagcatcaccctgaccgccggtgccgggtcagccagcaccagcctgtcg
agcctgttcaaggccggcagcggcgcgtggagctttgcgccgagtattagcctgccgatc
ttcgacgccggcagtaatcgggctacgctggactcagccaaagtggaacgcgagatacag
gcgcagacctaccagctgaccttgcagactgcgttcaaggaagtggccgatgcactggcg
gtgcgcagcaccctggaccagcgcctgagcgcccagcaagcgctgaccgaggccagtcgc
aaaagctacgagctgtcggatgcactgtaccgcagtggttcgcaaagctttcttgaagca
ctggtttcccagcgttcgctgtacagcgccgaacaagatctgatcaccctgcgactggcc
gaacaaagcaaccgcgtgacgttatacaaagtgctgggcggtggctggaactga
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