Syntrophotalea carbinolica: Pcar_2126
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Entry
Pcar_2126 CDS
T00285
Name
(GenBank) efflux pump, RND family, outer membrane protein
KO
K12340
outer membrane protein
Organism
pca
Syntrophotalea carbinolica
Pathway
pca01501
beta-Lactam resistance
pca01503
Cationic antimicrobial peptide (CAMP) resistance
pca02020
Two-component system
pca03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pcar_2126
09132 Signal transduction
02020 Two-component system
Pcar_2126
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pcar_2126
01503 Cationic antimicrobial peptide (CAMP) resistance
Pcar_2126
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_2126
02044 Secretion system [BR:
pca02044
]
Pcar_2126
01504 Antimicrobial resistance genes [BR:
pca01504
]
Pcar_2126
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_2126
Secretion system [BR:
pca02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Pcar_2126
RTX toxin transporter
Pcar_2126
Multiple protein transporter
Pcar_2126
RaxAB-RaxC type I secretion system protein
Pcar_2126
Antimicrobial resistance genes [BR:
pca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Pcar_2126
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Pcar_2126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Nitroreductase_C
Motif
Other DBs
NCBI-ProteinID:
ABA89365
UniProt:
Q3A2P2
LinkDB
All DBs
Position
complement(2476605..2478131)
Genome browser
AA seq
508 aa
AA seq
DB search
MRCIYMAFVLVLLAGFPVAAQPPADTFSPSGASVPTLTLNDVLRMALERNLDLQAQQYDT
RAGDAEVSKAYGLYDPVLDLAYAEGESRQRLNLQFYSAQSRERYRQFDLGLTQKIPTGAD
LSLEFTNLRSDQDPAPGMNPSYEGELTFSLVQPLLRGFGSTVTEQDILFAVKDRDISIED
LRESAFLVLADSRDTFFEVLRLRDNVRYREASVALAASLLKENRARVKAGVLPRVDELEA
EFGLKQRERDLLDAQREYRDGLDGLALLLDLKAPIALVDGQPGIPEIHPDLSEGYAEALA
KRPDVQRRLRTIERLELQSRIARNELLPALDLAASYGHKGLGRDYSDNLRDLGSNDFRNW
EVGLTLSYPLGNREARHEYRRSEFERKGREAQLGQLKNQVHTEVQAAIRLLGVSRKKIDV
SASQLAFAEEKLRTLLKRKEVGLATTRQVLEGEEDYALAQTDQAAALSDYNKAVTEYYKV
TGQLLDQEHVRFVDEFKNESQPLLQYKP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtatttacatggcctttgttcttgtgttgctggcggggtttccggtagcggcg
cagccccctgccgataccttctcgccatcaggagcgtcggtgccgacactgaccttgaac
gatgtcttgcggatggccctggaacgcaacctcgatttgcaggctcagcagtacgatacc
cgtgccggtgacgccgaagtcagcaaagcctacggtctctacgatcccgttctcgatctt
gcctacgctgaaggggagagccgccagcgacttaacctgcaattttacagcgctcagtcc
agggaacgttaccggcaattcgatcttggacttactcagaaaattcccaccggtgctgat
ctgagtctcgaatttaccaatttacgctccgatcaggatcctgctccgggcatgaatcct
tcctacgaaggggaacttaccttcagtttggtacagcccctgttgaggggttttggtagt
accgtcaccgaacaggatattctgttcgccgtcaaagaccgggatatttccatagaagat
ctgcgcgaaagcgcctttctggtgctggccgattcccgggatacttttttcgaggtgtta
cggttgcgtgataacgtacgttatcgtgaggcatccgtggccctggccgccagtctgctc
aaggaaaaccgggccagggtcaaggccggggttttgccccgagtcgatgagctggaggcc
gaattcggccttaaacaacgggaacgggatttactggatgcgcagcgcgaataccgggat
gggctcgatggcctggcattgctgctcgatctgaaagcccctattgctttagtcgatggg
cagcccgggattccagaaatccaccctgacctgtccgaaggctacgccgaagcccttgcc
aaacgccccgatgtgcaacgccgattgcgcaccatcgaacgtctggaactgcaaagtcgc
atcgcacgcaatgagcttctaccggccctggatctggccgccagctacggtcacaaagga
ctcgggcgggattatagcgataatcttcgcgacctcggttccaatgattttcgcaattgg
gaggtcgggttgaccctttcctatccgctgggcaaccgcgaagcccgccacgaatatcgg
cgcagcgaattcgaacgcaagggccgggaggcccagctgggccagttgaagaatcaggtg
cataccgaagtgcaggccgctatccggttgcttggtgtgagccgcaaaaagatcgacgtt
tccgccagtcaattggcctttgccgaggaaaaactacgtaccttgctcaaacgcaaggag
gtcgggctggccaccacccggcaggtgctggaaggcgaggaggattatgccttggcgcag
accgatcaggcggctgccttatccgattacaataaggccgtgaccgaatattataaagtg
accggacaactgctggaccaggaacatgtgcggtttgtcgatgaattcaagaacgaatca
cagcccctgctccaatacaagccatga
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