Pseudomonas canadensis: V6L78_20655
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Entry
V6L78_20655 CDS
T10710
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa01501
beta-Lactam resistance
pcaa02024
Quorum sensing
Module
pcaa_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_20655
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L78_20655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_20655
01504 Antimicrobial resistance genes [BR:
pcaa01504
]
V6L78_20655
Transporters [BR:
pcaa02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L78_20655
Antimicrobial resistance genes [BR:
pcaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L78_20655
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
V6L78_20655
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
V6L78_20655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Gp58
DUF6710
Motif
Other DBs
NCBI-ProteinID:
WWL87373
LinkDB
All DBs
Position
complement(4449018..4450427)
Genome browser
AA seq
469 aa
AA seq
DB search
MGLALLLSACAVGPDYHRPEVIEPAQFKEAQGWRQATPSDSLARGAWWELYGDRQLNDLV
VRLNTSNQTVAQAEARFRQAQALVRSSRGAFYPTVDLSVGKTRASQGTGSSNASLSSSSS
GIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQLRV
MDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLIWQRAQL
ENAIAVLIGEAPANFNLAVSKDIPALPQIPVSLPSQLLERRPDIASAERSVIAANANIGV
AKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTIASY
DETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALDAARESLRLTQNQYKAGLIAY
LDVVTTQATALSNERTVLTLLQTRLVASVQLIAALGGGWDGQTPIAEKD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggattggcgttgttgctcagcgcctgcgccgttggcccggactaccaccggccagag
gtcatcgaaccggcgcaattcaaggaagcccaaggctggcgccaagccaccccaagcgac
tccctggcccgtggcgcctggtgggaactgtacggcgaccgtcagctcaacgacctggta
gtacgcctgaacacctccaaccagaccgtggcccaggccgaagcgcgttttcgccaggcc
caggccttggtgcgcagttcacgcggggcgttttaccccaccgtcgacctgagcgtcggg
aaaacccgcgccagccagggcaccggcagcagcaacgcgagcctgagcagctccagcagc
ggcatccgcgacaccctcaatgcccagttgggcgtgagctgggaagcggacatctggggc
aaattgcgccgtggcctggaagccaatgaagccagcgccgaagccagctcggcggacttg
gcggcgatgcgcctgagccaacaatcggaactggtgcaaagctacctgcaactgcgcgtc
atggatgaacagacgcgcttgctgcaagccacgctggagacctatcagcgctccctgcaa
atgaccgaaaaccaataccgtgccggggtttccggcaaggacgcggtggcccaggcacaa
acccagctcaagaccacccaggccagcctgatcgacctgatctggcagcgcgcccagctg
gaaaacgcgattgccgtgttgatcggcgaagcgccggccaacttcaacctggcggtgagc
aaggacatcccggcactgccgcagattccagtgagcctgccatcgcaactgctggagcgc
cgcccggacatcgcctcggccgaacgctcggtgattgccgccaacgccaacatcggcgtg
gccaaggccgcctactacccggacctgagcctgagcctggccggtggttactccagcagc
acctacgccgactggatcagcctgccgaaccgcttctggtcggtggggccaaaactggcc
atgacgttgtttgacggtggccaacggtcagcggaagtcgaccgcaccatcgccagctac
gacgagactgtcgccaagtaccgccagaccgtgctggatggtttccgtgaagtggaaaac
tacatggtgcagctcaaggtgctggaagacgaggcggtggtcagcaatgaagcactggac
gccgcccgtgaatcgttacgcctgacccagaaccaatataaggcggggctgattgcctac
ctggatgtggtcaccacgcaagccacagccctgagcaacgagcgcacggtattgacgttg
ctgcagacacgcctggtggccagtgtgcaattgatcgcggcattgggcggtggctgggac
gggcagacgccgattgccgagaaagactga
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