Pseudomonas canadensis: V6L78_27480
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Entry
V6L78_27480 CDS
T10710
Symbol
adeC
Name
(GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa01501
beta-Lactam resistance
pcaa02024
Quorum sensing
Module
pcaa_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_27480 (adeC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L78_27480 (adeC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_27480 (adeC)
01504 Antimicrobial resistance genes [BR:
pcaa01504
]
V6L78_27480 (adeC)
Transporters [BR:
pcaa02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L78_27480 (adeC)
Antimicrobial resistance genes [BR:
pcaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L78_27480 (adeC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
V6L78_27480 (adeC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
V6L78_27480 (adeC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WWL83597
LinkDB
All DBs
Position
5905524..5906981
Genome browser
AA seq
485 aa
AA seq
DB search
MSKSLLSLAVTAFVLSGCSLIPDYRRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFF
HDPALQQLIQTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRTPARLS
QTGESTISSQYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANA
YLTWQADKELLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALARYT
RQVAQDENSLTLLLGTGLPANIASKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAA
NANIGAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLD
YSKIQKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLAERRYR
IGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNEQTAKNEPLKEEAP
ALKLF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctactttccctagccgtcacggcattcgtgctcagtggctgctcgctg
atacctgactatcggcgccccgaagcgccggtggccgcacagttcccgcaggggccggcg
tattcgtcggcccaggcgccgagccaggccgctgccgagcagggctggaagcagtttttc
catgaccctgccctgcaacagctgatccagaccgcgctggtgaacaaccgcgacctgcgt
gtcgcggccctgaacatcgacgcctatgccgcgcagtaccagatccagcgcgccgacctg
ttcccggccgtgtcggccacgggcagcggcagccgttcgcgtacgccggcccgcctgtcg
cagaccggcgaatcgaccatcagcagccaatactcggccggtctcgggatcagctcctat
gagctggacctgttcggtcgcgtacgcagcctgagtgaagaagccctgcaaaagtacttc
gccactgaagaagcgcggcgcagtacccagatcagtctggtggccagtgtggccaatgcc
tacctgacctggcaggccgacaaggaactgctcaagctcacccaggacaccctggatgcc
tacgagcagagcttcaagctcacctcgcgcagcaatgaagtcggcgtggcctcggccctc
gacctgagccagtcgcgcacctcggtggaaaacgcccgggttgccctggcgcgttatacc
cgccaggtggcccaggacgaaaacagcctgaccctgctgctgggcaccggcctgccggcg
aatatcgccagcaagccgctgtcggatgacctgctcagcgaagtgccggccggcttgccg
tccgacctgctacaacgtcgccccgatatcgtccaggccgagtacaacctcaaggccgcc
aacgccaacatcggcgcggcccgagcggcgttcttcccgagcatcaccctgactgccagt
gctggcaccgcgagcccaaacctgggcggcttgttcaagggcggctcgggcacctggtcg
ttcgccccgcagatcaacatcccgatcttcaacgccggcagcctgcgcgccagcctggac
tactcgaagatccagaaagagatcaacgtggcgaactacgagaaggcgattcagaccggc
ttccaggaagtctccgacggcctcgccgcacgtgagacctacaagcagcaactggatgcc
cagcgtggcttcgtcgcggccaaccaggattactaccgcctggccgagcgtcgctaccgc
attggtgtcgacagcaacctgacgttcctcgatgcccagcgccaactgttcagtgcccag
caatcgctgatcaccgatcgcctggcgcagctgaccagcgaggtcaacctgtacaaggcc
ctcggcggcggctggaacgagcagaccgcgaagaatgagccgttgaaagaagaagcaccg
gcgctgaagttgttctga
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