Pseudomonas canadensis: V6L78_29765
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Entry
V6L78_29765 CDS
T10710
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa01501
beta-Lactam resistance
pcaa02024
Quorum sensing
Module
pcaa_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L78_29765
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L78_29765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_29765
01504 Antimicrobial resistance genes [BR:
pcaa01504
]
V6L78_29765
Transporters [BR:
pcaa02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L78_29765
Antimicrobial resistance genes [BR:
pcaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L78_29765
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
V6L78_29765
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
V6L78_29765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WWL84034
LinkDB
All DBs
Position
complement(6370479..6371990)
Genome browser
AA seq
503 aa
AA seq
DB search
MPRRISRELKTLSVWALSLAISGCIGTGGIAPQGQSLDANHLATDEAIQSAAQDARWPTG
QWWQAYGDPQLNHWVDLATQHSPSLAMAAARVRQARAMAGVAESAESLQINSDTTLKRHN
WPKDQFYGPGELSGANTWDNNASLGLSYALDLWGRESNATERAVDLAHMSAAEARQAQLE
LQNNVVRAYIQLSLHYANRDIVAATLAQQQQILDLANKRLNAGIGTHFDVSQAETPLPET
HRQLDALDEEIALSRNQLAALAGKGPGEGAQLQRPSLSLAAPLKLPSSLPAQLLGQRPDV
VARRWQVAAQARGIDVAHAGFYPNVDLVGSLGYMATGGGMLEFLAGKKFNYTVGPAITLP
IFDGGRLRAELGEASAGYDIAVAQYNQTLVNALKGISDQLIRRESMDKQATFAAQSVASA
QKTYDIAMIAYQRGLTDYLNVLNAQTLLFHQQQIEQQVQAARLSAHAELVTALGGGLGAG
NDVPQDFKTLPSKTPAALAVFDH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcagcagagagcttaagactctcagtgtttgggctttatcgttagca
atcagcggctgcatcggaaccggaggaatcgccccacaaggccagtctctcgacgccaac
cacctggctaccgacgaagccatccagagcgccgcccaggacgcccgctggcccaccggg
caatggtggcaagcctacggcgacccgcaactgaaccactgggtcgacttggccacgcag
catagcccgagcctggccatggccgccgcgcgagtgcgtcaggcgcgggccatggccggc
gttgccgagtcggccgagtcgctgcagatcaacagcgacaccaccctcaagcgccacaac
tggccgaaggaccagttctatggtcccggcgagctgagcggtgccaacacctgggacaac
aatgcctccctgggcctgagctacgccctcgacttgtggggccgcgaaagcaatgccacc
gaacgtgccgtcgacctggcgcacatgagcgccgccgaagcgcgccaggctcaactcgaa
ttgcagaacaacgtggtgcgcgcctatatccagttgtcgttgcattacgccaaccgcgat
atcgtcgcggcgaccctggcgcaacagcagcagatcctcgacctggccaacaagcgcttg
aacgctgggatcggcacccacttcgatgtcagccaggccgaaaccccattgccggaaacc
catcggcaactggacgccctcgacgaagagatcgccctgagccgtaaccagttggcggcc
ctggcgggcaaaggcccgggggaaggcgcgcagttgcaacgcccgagcctgtccctggcc
gcgccgttgaagttgccgtcgagcctgcccgcgcaattgctcggtcaacgtccggacgtg
gttgccagacgctggcaagtcgcggcccaggcccgtggcatcgatgtggcccacgccggt
ttctaccccaacgtcgatctggtcggcagcctcggctacatggccaccggtggcggcatg
ctggaattcctggcgggcaagaaattcaactacaccgtgggacctgcgatcaccttgccg
atcttcgacggcggccgcctgcgtgcggaactgggcgaagccagcgccggttatgacatc
gccgtcgcccagtacaaccaaaccctggtcaatgcgctcaagggcatcagcgaccaactg
atccgccgcgaatccatggacaagcaagcgaccttcgccgcgcaatcggtggcttcggca
cagaaaacctatgacatcgcgatgatcgcctatcaacgcggcctcaccgattacctcaat
gtcctgaatgcgcagaccttgctgtttcatcagcaacagatcgagcaacaggtacaggcc
gctcgcctgagtgcccacgccgagctggtgacggccctgggcggcggcctcggcgccggc
aacgatgtgccgcaagacttcaagaccctcccgagcaagaccccggcggcgctggccgtg
tttgatcactga
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