Pseudomonas cannabina pv. alisalensis: JGS08_04065
Help
Entry
JGS08_04065 CDS
T07379
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab01501
beta-Lactam resistance
pcab01503
Cationic antimicrobial peptide (CAMP) resistance
pcab02020
Two-component system
pcab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JGS08_04065
09132 Signal transduction
02020 Two-component system
JGS08_04065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JGS08_04065
01503 Cationic antimicrobial peptide (CAMP) resistance
JGS08_04065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_04065
02044 Secretion system [BR:
pcab02044
]
JGS08_04065
01504 Antimicrobial resistance genes [BR:
pcab01504
]
JGS08_04065
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_04065
Secretion system [BR:
pcab02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JGS08_04065
RTX toxin transporter
JGS08_04065
Multiple protein transporter
JGS08_04065
RaxAB-RaxC type I secretion system protein
JGS08_04065
Antimicrobial resistance genes [BR:
pcab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JGS08_04065
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JGS08_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQN24593
LinkDB
All DBs
Position
905566..906927
Genome browser
AA seq
453 aa
AA seq
DB search
MRRVGGWALLSAAGLLLTSLCMADNRVEACPGSSRLPDTLNLATAVSVALCADPKLREAW
LTELARQADMDAEHSAYYPTVEGQFQKGRAGKTTRYPGFSEANSQLNASTSIYGLNMSWV
LFDFGLRAAKVESARQLLNAASSSRIEEVQKSMLATARVFYQVQANTALLQAKVSAERLA
DNSLKAADAKYHAGAGEQTDRLQAQSSYAEAQLDRVMAEGDLAAARGELASQLGLSPAAS
LKLVALDEPGSEDVAFLGDVNALMEQARALHPAIEKARADWAASQAKVEAAKAQGRPTVS
LFSNYSRQDTPIEQVSTRQEIDTWTIGVQITVPIFDGFLNRRRARAASYESAAREQALHE
VENSIALSVWKSQQALESRTRALAISRLFVESASKSYEIAQGRYKAGVGSIIELLRSQND
LASATQKRVESLVNWHNAKLQLASDLGSLNIAD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgtgtcggcgggtgggccttgttgagcgccgccggcctgttactgacgtcgctg
tgcatggcggataaccgcgtggaggcgtgccctggttccagtcggcttcccgataccctg
aacctcgcgacggcggtgtctgttgcgttgtgtgccgaccccaaactgcgtgaagcgtgg
ctgaccgagctggcgcgtcaggcggacatggacgccgagcactcggcctattacccgact
gtggaggggcagtttcaaaaaggccgggccggcaagaccacgcgttatccgggtttttcc
gaagccaattcacagctgaatgccagtaccagcatctacggcttgaacatgagctgggtg
ctcttcgacttcgggcttcgcgccgcaaaagtcgaaagtgcccgccagttactgaatgcc
gccagcagcagtcgcattgaagaagtgcagaagtcgatgcttgccaccgccagggtcttt
taccaagtgcaggccaataccgcgctgttgcaggccaaagtcagcgctgagcgtcttgcc
gacaacagcttgaaagccgccgacgccaaataccatgctggcgccggcgagcagacggat
cgcctgcaggcgcaatccagttatgccgaggcgcagctggatcgagtgatggcggaaggt
gacctggccgcggcgcgaggcgaattggccagccagctcggattatcgcctgcggcctcg
ctcaagctggttgcgctggatgagccgggcagtgaagacgtggcgtttctgggggacgtc
aacgcgttgatggagcaggccagggcgctgcatccggctatagaaaaagcccgtgcagac
tgggcggcgagtcaggcaaaagtggaggcggcgaaagcccagggccgacccaccgtctcg
ctgttcagcaattacagtcgccaggacacgcctatcgagcaggtgtccacccgtcaggag
atagacacctggacaatcggcgtgcagatcacggtgccgattttcgatggctttctcaat
cggcgcagggcgagggctgccagttacgaaagcgctgctcgcgaacaggcgttgcatgag
gttgaaaacagtattgcgctgagcgtctggaagagtcagcaggcgctggaatccagaacc
cgggcactggccatcagtcggctgtttgtcgagagtgcgagcaagtcttacgaaattgct
cagggtcgttacaaagccggagtgggcagtattatcgagcttctgcgttcgcagaatgac
ttggcctcagcgactcagaaacgtgtggaatcgctggtcaactggcataacgccaagctg
caactggcctctgatcttggcagtctgaacatcgcagactga
DBGET
integrated database retrieval system
