Pseudomonas cannabina pv. alisalensis: JGS08_21025
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Entry
JGS08_21025 CDS
T07379
Name
(GenBank) AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcab
Pseudomonas cannabina pv. alisalensis
Pathway
pcab01501
beta-Lactam resistance
pcab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JGS08_21025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JGS08_21025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcab02000
]
JGS08_21025
01504 Antimicrobial resistance genes [BR:
pcab01504
]
JGS08_21025
Transporters [BR:
pcab02000
]
Other transporters
Pores ion channels [TC:
1
]
JGS08_21025
Antimicrobial resistance genes [BR:
pcab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JGS08_21025
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JGS08_21025
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JGS08_21025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QQN21054
LinkDB
All DBs
Position
4695446..4696906
Genome browser
AA seq
486 aa
AA seq
DB search
MSKSLISFAVTAFILGGCSLIPEYKQPEAPVAAQYPQGPAYTPAEAAKMAAAEQGWRHFF
NDPALQQLIETALLNNRDLRVAALNIDAYRAQYRIHRADLFPAVSATGSGARQRVPADQT
QTGQSAITSSYSATLGVSAYELDLFGRVRSLSEQALETYFATEEARRATQISLVANVANA
YMTWQADKELLKLTQDTLKTYEESFRLTSRSNEVGVSSALDLSQSRTAVESARARLAQYQ
RLVAQDQNSLVLLLGTGLPDNLPASQLLDSDMLTEMPAGLPSDLLQRRPDILQAEHTLKA
ANANIGAARAAFFPSISLTASAGTGSTELSGLFKGGSGTWLFQPSINIPIFNAGSLRASL
DYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVTANQDYYRLAERRY
RIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGWYERTGQTETISKEK
PSVQLF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcattgatctcttttgcagttaccgcgttcatactcggcggctgctctttg
atccccgagtacaagcagccggaagccccggtcgccgcccaatatccacaaggtccggcc
tacacgccggccgaggcggccaaaatggccgctgcggagcaaggctggcgccacttcttc
aatgatccggcgttgcaacagctgatcgagaccgcgctgctcaacaaccgtgacctgcgg
gtcgcggcgttgaacatcgacgcctatcgcgcccagtaccgcattcatcgcgcggacttg
ttccccgctgtttccgcgaccggcagcggcgctcgccaacgcgtgccggccgaccagacg
cagaccggtcagtccgcgatcaccagtagctactcggccacgctgggcgtcagcgcctac
gagctggacctgttcggtcgcgtgcgcagcctcagcgaacaggcactggaaacctacttc
gccacggaagaagcgcgtcgcgccacccagatcagtctggtggccaacgtcgccaacgcc
tacatgacctggcaggccgacaaggaactgctcaagctgacgcaggacaccctcaagacc
tacgaagaaagcttccgcctgacctcgcgcagcaacgaagtcggtgtttcttcggcgctg
gacctgagccagtcgcgtaccgctgtcgaaagcgctcgcgccagactggctcagtaccag
cgtctggtcgctcaggaccagaacagcctggtgctgttgcttggcaccggcctgccggac
aacctgccggccagccaactgctggattccgacatgctgaccgaaatgccggccggtctg
ccgtccgacctgttgcagcgtcgtccggacattctgcaagccgagcacacgctcaaggcc
gccaatgccaacatcggcgcagcgcgtgcagcgttcttcccgagcatcagcctgaccgcc
agcgccgggaccggcagcaccgagctgtccggcctgttcaagggtggttcgggaacctgg
ctgttccagccgagcatcaacatcccgatcttcaacgccggcagcctgcgcgccagcctc
gattactcgaagatccagaaagaaatcagtgtcgccaactacgagaaggccattcagacg
gccttccaggaagtgtccgacggcctggcttcgcgcaagacctacgacgagcagctccag
gcgcagcgtgactttgtcactgccaaccaggattactaccgtctggccgagcgtcgctac
cggatcggcatcgacagcaacctgaccttcctcgacgctcagcgctcgttgttcagcgcg
caacaaacgctgatcactgatcgcctgtcgcagctgaccagcgaggtcaacctgtacaag
gccctcggcggcggctggtatgaaagaaccgggcagaccgaaaccatctccaaagagaag
ccttcggtgcagctgttctaa
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