Physeter macrocephalus (sperm whale): 102996438
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Entry
102996438 CDS
T06011
Symbol
MMP1
Name
(RefSeq) interstitial collagenase isoform X1
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03320
PPAR signaling pathway
pcad04657
IL-17 signaling pathway
pcad04926
Relaxin signaling pathway
pcad05171
Coronavirus disease - COVID-19
pcad05200
Pathways in cancer
pcad05219
Bladder cancer
pcad05323
Rheumatoid arthritis
pcad05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
102996438 (MMP1)
09152 Endocrine system
03320 PPAR signaling pathway
102996438 (MMP1)
04926 Relaxin signaling pathway
102996438 (MMP1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102996438 (MMP1)
09162 Cancer: specific types
05219 Bladder cancer
102996438 (MMP1)
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
102996438 (MMP1)
09163 Immune disease
05323 Rheumatoid arthritis
102996438 (MMP1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102996438 (MMP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcad01002
]
102996438 (MMP1)
Enzymes [BR:
pcad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
102996438 (MMP1)
Peptidases and inhibitors [BR:
pcad01002
]
Metallo peptidases
Family M10
102996438 (MMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_3
Reprolysin_4
DUF4953
Peptidase_M66
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
102996438
NCBI-ProteinID:
XP_023971085
Ensembl:
ENSPCTG00005007864
UniProt:
A0A2Y9S4J4
LinkDB
All DBs
Position
16:30597286..30612754
Genome browser
AA seq
470 aa
AA seq
DB search
MPRLPLLLLPLLWGVGSHSFPAATSETQEQDVETVQEYLENYYNLKSDGKQVERQRNSDP
VVEKLKQMQKFFGLKVTGKPDAATLSVMKQPRCGVPDMVQFVLTQGNPRWEDTHLTYRIE
NYTPDLSRADVDHAIEKAFQLWSNISPLTFTKVSEGQADIMISFVRGDHHDNSPFDGPGG
NLAHAFQPGPGIRGDVHFDEDERWTNNFRDYNLYRVAAHELGHSLGLSHSTDIGALMYPN
YIFSGDVQLSQDDINGIQAIYGPSQNPTQPIGPQTPQVCDSKLTFDAITTIRGEVMFFKD
RFYMRTNPFYPGAELNFISVFWPHLPNGLQAAYEVANRDEVRFFKGNKYWAVKGQDVLYG
YPKYIYKSFGFPKTVKNIDAAVSEEDTGKTYFFVANKCWRYDEYKRSMDAGYPKMIAEDF
PGIGNKVDAVFQKDGFFYFFHGTRQYKFDTKTKRILTLQKANSWFNCRKN
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcccagactgcctctgctgctgctgccgcttctctggggcgtggggtctcacagcttc
ccagcagcgacttcagaaacacaagagcaagatgtggagacagtgcaggaatacctggaa
aactactacaacctgaagagtgatgggaaacaagttgaaagacagagaaacagtgaccca
gtagttgaaaaactaaagcaaatgcaaaaattctttgggctgaaggtgacggggaaacca
gatgctgcaaccttgagtgtgatgaagcagcccagatgtggggtgcctgacatggttcag
tttgttctcactcaggggaacccgcgatgggaggacacacatctgacctacaggattgaa
aactacacaccagatctgtcaagagcagatgtggaccatgccattgagaaagcctttcaa
ctctggagcaacatctcacccttaaccttcaccaaggtctctgagggtcaagcagacata
atgatatcctttgtcaggggagatcatcatgacaattctccctttgatggaccaggtgga
aaccttgctcatgcttttcaaccaggcccaggtatcagaggggatgtccattttgatgaa
gatgaaaggtggaccaacaatttcagagattataacttgtatcgtgtggcagctcatgaa
ttgggccattcccttggactttctcattccactgacattggggctttgatgtaccccaac
tacatcttcagtggtgatgttcagctatctcaggatgacatcaatgggatccaggccatc
tatggaccttcccaaaatcccactcagccaattggcccacaaaccccacaagtgtgtgat
agtaagctaacttttgatgctataactacaatccggggagaagtgatgttctttaaagac
aggttctacatgcgcacaaatcccttctacccaggagctgagctcaatttcatttctgtt
ttctggccccatctgcctaatggacttcaggctgcttatgaggttgccaatagagatgaa
gttcggtttttcaaaggtaataagtactgggctgttaaggggcaagatgtgttatacgga
taccccaagtacatctacaaatcctttggtttcccaaagactgtgaagaacatcgacgct
gctgtttctgaggaagatactgggaaaacgtacttctttgttgctaacaaatgctggagg
tatgatgaatataaacgatccatggatgcaggttatcccaaaatgatagcagaagatttt
cctggaattggtaataaagttgatgctgttttccagaaagacggatttttctatttcttc
catggaacaaggcaatacaaatttgataccaaaactaagagaattttgactctccaaaaa
gctaatagctggttcaactgcagaaaaaattga
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