Pituophis catenifer annectens (San Diego gophersnake): 139322346
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Entry
139322346 CDS
T11059
Symbol
ADAR
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04622
RIG-I-like receptor signaling pathway
pcae04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139322346 (ADAR)
04623 Cytosolic DNA-sensing pathway
139322346 (ADAR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcae03041
]
139322346 (ADAR)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
139322346 (ADAR)
Spliceosome [BR:
pcae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139322346 (ADAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
Motif
Other DBs
NCBI-GeneID:
139322346
NCBI-ProteinID:
XP_070807537
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MYISVSSSLLLWEQEVSLPALGQCDAMHIPRHGKTQSGSSTSAENVFTPALLPHHRAMSR
FPAASDQTSPRSDRLEDFHQKQVLFLQGKRSEASLWKPGAQRCQEPQTFFPPPRSNSWYN
YRETPRRPPCKGSWPAPKQPFPPQPSYFAVTYPKGAVDRLVSSFQGLALSKQDVEGDLLG
ILRDLKSGQTISARHLAQQLRVQKKVVNHYLYKLHQRGQLSRTETTPPLWRLADGRDFAE
ASRAGRPAIRDKDSGSLFDLGIEEEVEGSSASDREDSFGSPDMAEVKEKICSFLFGVVDS
TAYNLAKSIGLSKARDVNATLLALEKLGEVHKENVNPPKWSLTDNKRKRMQVKAKAEEVR
QAVPPDPEPPAPCLEPEATPADVPSPRPSPPPPPPPPPPPPENEEKKIENGQQAAEPIEP
GCPPWASPACKRPRYRRFSPYDFFESSSWATDDIPEDMNAISNQDESRYIMGSPLYPKYP
APLDTAFQCTPLEKLMDCQKKNPVSGLIEYTQYMYQHCEFVLLKQSGPSHEPRFKFQAKI
DTRHFPPAEAGSKKLAKQEAAAIAMKILLHEAQHEGEDSVGPETSLYEDTSLREEEMPEQ
ADPEASSTAPQPNLLCGKNPISALMEYAQKLGSVCEFKLLSQEGPPHDPKFQYCVKVGER
VFPAVVSNSKKGAKQMAAEVAMKGLTGETTGSPAQVEAPSEPMLDVQASQLANPEEFKTV
SAKGVGELIKYLNSNPVSGLLEYARANGFAAEFKLINQTGPPHDPKFVFQAKVGGRWFPS
VTAHSKKQGKQEAADAALRVLIGENEKAEHAAEGLGITELPVSGSTLHDQIAMLSHQRFN
ALTARIQHSLLGRKILAAIIMRRGQEGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEI
ISRRGFIRFLYNELMTFDPLAPEESIFKLSEDGRLKIKDDVSFHLYISTAPCGDGALFDK
SCSDQANTAGEDQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTM
SCSDKILRWNVLGLQGALLSHFIHPVYLRSVTLGYLYSQGHLTRAICCRMSRDGNPLGTR
LPTPYLVNHPEVGRVSVYDSARQTGKTKESSINWCLPDGTNVEVLDGTKGKVDGPKLDIS
RVSKQNLFQLFQLLCTKMAREDLKKFTVYSEAKESAADYQSAKQQFFWGLQEMGYGSWIC
KPQEEKTFVLPEPAPTPFL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtacatatcagtctcttcttctctgctgctgtgggaacaggaagtttctcttccagcc
ttgggccagtgtgatgccatgcacatacctcgtcatgggaaaacgcaaagtggttcttcg
acgtcggctgaaaatgtcttcacccctgcgcttcttccccaccatcgtgctatgagcaga
ttccctgctgcttcagaccagacctcgcccagatccgacagactcgaagattttcatcag
aagcaggtcctcttcctgcaaggaaaacgttccgaggcttcgctgtggaagcccggtgcg
cagaggtgccaagagccacagacgttcttcccgccgccccgttcgaattcatggtacaac
tacagggagacccccagaagacctccctgtaagggtagctggccggcaccgaagcagccg
tttcctcctcaaccaagttacttcgcggttacttatccgaagggtgccgtcgaccgactc
gtctccagctttcaggggctggctctgagcaagcaggacgttgaaggggatctcctgggg
atcctgagggatctgaaatcggggcagaccatctccgctcgccacctggcccagcagctg
cgcgtccagaagaaagtggtcaaccattatctctacaagcttcaccaacgagggcagctg
agtcggacggagaccaccccgccattgtggaggttagccgacggtcgcgacttcgccgaa
gcaagccgagcgggacgtccggccatccgggacaaagacagcggttccctcttcgacttg
gggatcgaagaagaagtagaaggaagttccgcttctgaccgggaggactcgtttggttct
cctgacatggccgaagtcaaggagaagatctgcagcttcctgttcggggtggtggactcc
acagcttacaacctggccaagagcatcggcttgagcaaagccagggatgtcaacgccacc
ctcctggccttggagaagctgggcgaggtgcacaaggagaacgtcaaccctcccaagtgg
tcgctgacggacaacaagcggaaacggatgcaagtcaaggccaaagccgaagaagtccgg
caggcagtcccgccggaccccgaaccaccagccccgtgcctcgaaccggaggcaacccct
gccgacgtgccctcccctcgcccttctccccctccgcctccgcctccgcctccccctccg
ccggagaacgaggagaagaaaatcgagaacgggcagcaggccgccgagccgatcgagccc
ggctgccctccgtgggcgagtcccgcttgcaagcgtccccgctaccgccgcttctcgcct
tacgacttcttcgagagcagcagctgggccaccgacgatatccccgaggacatgaacgcc
atcagcaaccaggacgagtcgaggtacattatggggtcccctctgtaccccaaatacccg
gctccgctggacaccgctttccagtgcacccccttggagaagctcatggactgccagaag
aaaaaccccgtcagcggcttgatcgaatacacccagtacatgtaccagcactgcgagttc
gtcttgctgaagcagagcgggccgtcgcacgagccacggtttaaattccaagccaagatt
gacacccgccacttccctccggccgaagcaggcagcaaaaaactagccaagcaggaagcg
gcggccatcgccatgaaaatccttctccacgaagctcagcatgagggggaagacagcgtg
gggcccgagacttccctgtacgaggacacctccctcagggaggaggagatgcctgagcag
gcagaccccgaggcctcgtccaccgccccacagcccaacctcctctgtgggaagaacccc
atcagcgccttgatggaatacgcccagaagctggggagcgtgtgcgaattcaagctgctc
tctcaggaaggaccgcctcatgacccaaagtttcaatactgcgtcaaagtgggcgaacgc
gttttccccgccgtggtctcgaacagcaagaagggagcgaagcaaatggccgccgaggtc
gccatgaaagggctgactggcgaaaccaccggctcacctgcgcaggtggaagcgccgtcc
gagcccatgctagacgtacaagctagccagctggccaatccggaggagttcaagacagtc
agcgccaaaggcgtcggcgagttgatcaagtacctgaattcgaatccggtcagcggactt
ctggagtacgccagggccaacggcttcgcagccgaattcaagctcatcaatcagaccggc
cctccccatgaccccaagttcgtcttccaggcgaaagtgggcggccgctggttcccgtcc
gtcacggcgcacagcaaaaagcagggaaagcaggaagcggccgacgcggcgctccgtgtc
ctcatcggggagaacgagaaggccgagcacgcggccgaagggctgggcatcacggagcta
ccggtcagcggaagcaccctgcacgaccagatcgccatgctaagccaccagcggttcaac
gccttgaccgcccgcatccagcacagcctgctgggacgcaagatcctagctgccatcatc
atgaggagggggcaggaggggctgggggtcgtggtcagcatcgggacagggaaccgctgc
gtgaaaggggaggagctgagcttgaaaggagagacggtgaacgactgccacgcggagatc
atctcccgaagggggttcatcaggttcctgtacaatgagctgatgacctttgaccccttg
gcgccggaagagagcatcttcaagctgtcggaagacggcaggctgaagatcaaagatgac
gtcagctttcacctgtacatcagcacggcgccttgcggggacggcgccctcttcgacaag
tcctgcagtgaccaggccaacacagccggggaggatcaacaccagcccctcttcgaaaac
cccaaacaggggaagctacgcaccaaggtggaaaacggagagggcaccatcccggtggag
tcgagcgacatcgtgccaacctgggacggcatccagcacggcgaacgcctccgcaccatg
tcctgcagtgacaaaatcctgcgctggaatgtgctcggcttgcaaggcgccttgttgtca
cacttcatacatccggtctaccttcgctcagtcacgcttggctacttgtacagccaaggt
catttgacccgcgccatttgctgccggatgtccagagacggcaaccccttggggacgagg
cttcccacgccctatttggtcaatcaccccgaggtcggccgggtcagcgtctacgactcg
gcgagacagacggggaaaaccaaggaatcgagcatcaattggtgcctcccggacggcacc
aacgtcgaagtcctggacggcacgaaaggcaaagtggacgggcccaaactggatatttcg
cgcgtctccaagcagaatctcttccagcttttccagctgctttgcaccaagatggctcgg
gaagatctcaagaagttcaccgtctactcggaggccaaagagtcggccgccgactaccag
agtgccaagcagcagttcttttggggcctgcaagaaatgggctacgggagctggatctgc
aaaccccaggaagagaagaccttcgtcctgccggaacccgctcccactccgttcctgtga
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integrated database retrieval system
