Paraburkholderia caffeinilytica: DSC91_002991
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Entry
DSC91_002991 CDS
T06448
Name
(GenBank) multidrug transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcaf
Paraburkholderia caffeinilytica
Pathway
pcaf01501
beta-Lactam resistance
pcaf02024
Quorum sensing
Module
pcaf_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcaf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSC91_002991
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSC91_002991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaf02000
]
DSC91_002991
01504 Antimicrobial resistance genes [BR:
pcaf01504
]
DSC91_002991
Transporters [BR:
pcaf02000
]
Other transporters
Pores ion channels [TC:
1
]
DSC91_002991
Antimicrobial resistance genes [BR:
pcaf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DSC91_002991
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DSC91_002991
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DSC91_002991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Phage_F
New_glue
C12orf66_like
Motif
Other DBs
NCBI-ProteinID:
AXL50672
LinkDB
All DBs
Position
1:complement(3272922..3274373)
Genome browser
AA seq
483 aa
AA seq
DB search
MVAFAVAMLTGCTLDPHYERPAAPVAVAYPKGDAYESTSAAASGTAAASASETAAAPGTV
APSTTTAAAPLGADMAWRNFFRDERLQRLIEIALDNNRDLRVAALNVAEYEAQYRITRAA
LAPSISASGSLTRERTSGVTTSSSDVNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQ
STQISLIATVATDYLTLLSDERLLQITEDTVKADQSTYDVTKRIQALGNSSMLDVQQAQN
SLASAKASLASYRRAVAQDRNNLVAVLGAPIPDDLPPAREFDDESMFADIGAGVPSLLLT
RRPDIVQAEHALKAANANIGAARAAFFPKIELTASAGTSSSTLSSLFKAGTGAWAFAPSV
SVPIFDYGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVAADRDYV
ASSQRYYSLAQARYKAGTDSFLTFLDAQRTLYTAQQQLATDSLSRQANLVTLYKVLGGGW
QGS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgtttgccgtcgccatgctgacagggtgcacgctggatccgcactatgaacgg
cccgcggcacccgttgccgtggcttatccgaaaggcgatgcgtacgagagcactagcgcc
gcggcttcgggaacggctgcggcttcagcttcggaaactgcagcggctccgggaacagtt
gctccgagcacgacgactgcagcagcgccgctcggcgccgacatggcgtggcgcaacttc
tttcgcgacgagcgtctccagcggctgatcgaaatcgcgctcgacaacaaccgcgacttg
cgcgtggccgcgttgaacgtggccgagtacgaggcgcaatatcgcatcacgcgtgccgcg
ctcgccccgtcgatcagcgcgagcggcagcctgacccgcgagcgcacctcgggcgtgacc
accagttccagcgacgtgaacgtcggcaccacgtcatgggagatcgacttcttcggacgc
ttgcgcagcctcaagcgccaggcgctggagaactatctcgcgaccgatgcgtcgcggcag
agcacgcagatcagcctgatcgcgacggtggcgaccgactacctcaccctgctgtccgac
gagcgccttctgcaaatcaccgaagacacggtgaaggcggaccagtcgacatacgatgtg
acaaagcgcatccaggcgttgggcaattcgtcgatgctcgacgtgcagcaggcgcaaaac
tcgttggcgagcgcgaaggcgagccttgcgtcttatcggcgcgccgtcgcgcaggatcgc
aacaacctggttgccgtgctcggtgcgccgattcccgacgaccttccgcctgcccgcgaa
ttcgacgacgagtcgatgttcgccgacatcggtgcgggcgtgccgtcgctgctgctcacc
cgtcgtcccgacatcgtgcaggcggaacacgcgctgaaggcggcgaatgcgaacattggc
gccgcgcgtgccgcgttctttccgaagatcgagctgaccgcttcggccggcacatcgagt
tcgacgctctcaagtttgttcaaggcggggacgggcgcctgggcgtttgcgccgagcgtg
tcggtgccgatcttcgactacggcagcaacaaggcctcgctcgacgtcgccaaaatcgag
aagcagatcgaggtcgccgattacgaaagcacgattcaaacggcgttcaaggaggtctcg
aacgcgctgaccgcgcgtgcaacttacgtcgatcaggtggcggcggatcgcgactatgtg
gcgtcgtcgcagcgctattactcgcttgctcaggcgcgctacaaggcgggtaccgacagc
ttcctcacgttcctcgacgcacagcgaacgctctacaccgcgcagcagcagctcgcgacg
gatagtctgtcgcgacaggccaatcttgtgaccttgtacaaggtgttaggcggcggttgg
cagggaagctaa
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