Porphyromonas cangingivalis: NCTC12856_01018
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Entry
NCTC12856_01018 CDS
T06514
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag01501
beta-Lactam resistance
pcag01503
Cationic antimicrobial peptide (CAMP) resistance
pcag02020
Two-component system
pcag03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC12856_01018
09132 Signal transduction
02020 Two-component system
NCTC12856_01018
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC12856_01018
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC12856_01018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcag02000
]
NCTC12856_01018
02044 Secretion system [BR:
pcag02044
]
NCTC12856_01018
01504 Antimicrobial resistance genes [BR:
pcag01504
]
NCTC12856_01018
Transporters [BR:
pcag02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC12856_01018
Secretion system [BR:
pcag02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC12856_01018
RTX toxin transporter
NCTC12856_01018
Multiple protein transporter
NCTC12856_01018
RaxAB-RaxC type I secretion system protein
NCTC12856_01018
Antimicrobial resistance genes [BR:
pcag01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC12856_01018
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC12856_01018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VEJ03520
LinkDB
All DBs
Position
1:complement(1159063..1160415)
Genome browser
AA seq
450 aa
AA seq
DB search
MTRSNKVKTILPCLVLILVALPLRAEPDTLSMKVCIDYALRHSPRIKGSKADRSIASADY
LEAIGRLLPSASASTSAYLNIGRGVDPKTNTYTDINTFRNNYGIESSMLLFDGLSTVFAL
RRSRLERAISIEQVRMTRDQVRLETIEAYHQVLFTQELYRQAREDIANSARVALRTQRMY
ELGMKSLPDVSEVRATEASDRVTLVRRHNDYEIALLNLKAKMNYPIDRPLVIEDSLTFVD
VMPSLLTAEEVYAVAVLRLPKAVIAEQKVKSSRAMYNSSIGAFFPKITLFAGYATSFSFA
TNETNYEPFADQLKKRRGEYIGVALSFDLFDGFRKSATFRRAKARHRAEEARREETLSEV
YKDISQSILEVNAAVKEYRATEEKARHLEQAYQATLRNYEAGNASSIDLSTASSRAKEAK
IERAHAYTTYLLRREWLDYYNGSVGEDEGL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgacacgctcaaacaaagtcaaaaccatcctgccatgccttgtgcttatacttgtggca
ctacccctgcgagcagagccggataccctctccatgaaggtctgtatcgactatgccctc
cgccatagtcctcgtatcaagggaagcaaggccgatcgctctattgcctctgcagactac
ctcgaagccatcgggcgacttctgccctccgcatccgcatcgacctccgcttacctcaat
atcggtcgaggtgtagaccccaagacaaatacctatacggacatcaatacctttcgcaac
aattacggcatagagtcttcgatgctcctcttcgacggactgagtacggtctttgctctt
cgtcgcagtcgtctggagcgtgccataagtatcgaacaagtccgcatgacccgagatcag
gtacggctggagaccatcgaggcttatcatcaggtactcttcactcaagagctgtaccgc
caagcccgagaggatatagccaacagtgcaagggtagccctccgtacccaacgtatgtac
gagctcgggatgaagtctcttcccgatgtttccgaagtgcgagcaacagaggcttctgac
agggtcaccctagttcgtcgccacaacgactacgagatagcactcctcaacctcaaagca
aagatgaactatcccatcgatcgccctttggtcattgaggactctttgaccttcgtagat
gtcatgccttcgctcctcactgccgaagaggtctacgccgtggctgtcctccgtctgccc
aaggccgtgattgccgaacaaaaggtcaagagcagtcgggcgatgtacaatagcagcatc
ggggctttcttccccaagatcacgctctttgcaggctatgccacaagtttttcgttcgcc
acgaatgagacgaactatgagccttttgccgaccagctcaagaaacggcgtggggagtac
ataggcgttgccctgtcgtttgatctcttcgatgggtttcgtaagagtgccaccttccgt
cgtgccaaggctcgccaccgtgccgaggaggctcggagggaagagaccctgagcgaagtc
tataaagacataagtcagtcaatcctcgaagtcaatgcggcagtgaaggagtacagagcc
acggaggagaaagcacggcatctggagcaggcctaccaagccaccttgcgcaactacgaa
gcgggcaatgcgagcagtatagacctcagcacggcatcctctcgtgcaaaggaggctaag
atcgaacgagcccatgcctacacgacttatctcctcaggcgtgagtggctggactactac
aatggatccgtaggagaggacgaaggactttag
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