Porphyromonas cangingivalis: NCTC12856_01249
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Entry
NCTC12856_01249 CDS
T06514
Symbol
abfD
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
pcag
Porphyromonas cangingivalis
Pathway
pcag00650
Butanoate metabolism
pcag00720
Other carbon fixation pathways
pcag01100
Metabolic pathways
pcag01120
Microbial metabolism in diverse environments
pcag01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pcag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC12856_01249 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NCTC12856_01249 (abfD)
Enzymes [BR:
pcag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
NCTC12856_01249 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
NCTC12856_01249 (abfD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
VEJ03833
LinkDB
All DBs
Position
1:complement(1414676..1416136)
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AA seq
486 aa
AA seq
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MMTSEQYVESLRKLNLQVYFMGEKIDNPVDHPMIRPSMNSVAMTYKLAEMDEYKELMTAT
SNLTGKTVNRFCHLHQSTEDLKNKVKMQRLLGQKTASCFQRCVGMDAFNAIYSTTYDMDK
ALGTEYHERFKKYMEFVQENDLVVDGAMTDPKGDRGLSPSQQEDPDLYLRIVEVREDGIV
VSGAKAHQTGAVNSHEHLIMPTIAMKEEDADYAVSFAVPSDAEGIIMIYGRQSCDTRKME
EGADIDVGNSQFGGHEALVVFDNVFVPMERVFMCREYQFAGLMVERFAGYHRQSYGGCKV
GVGDVLIGAAALAADYNGVPKASHIKDKLIEMIHLNETLYSCGIACSSEGHKLPAGNYLI
DLLLANVCKQNITRLPYEIARLAEDIAGGLMVTMPSEQDLRHPVTGPIVKKYLVGAKGKN
VENRMRILRLIENITLGTAAVGYRTESMHGAGSPQAQRIMIARQGDLEGKKALAREIARI
DVSLDK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagcgaacagtatgttgagagcttgagaaaactaaatctccaagtttacttc
atgggcgaaaagatcgataatcccgtcgatcacccaatgattcgtccttctatgaactct
gtggcaatgacttacaagctcgcagagatggatgagtacaaagagttgatgactgcaact
tctaacctcacaggcaagactgtcaatagattctgccaccttcaccagagtacagaagac
cttaaaaacaaggtgaagatgcaacgtcttctcggtcagaaaacggcttcttgtttccaa
cgctgtgtgggtatggatgctttcaatgcgatctactctactacttacgacatggacaag
gccctcggtacagagtaccacgagcgtttcaaaaaatatatggaattcgtgcaggaaaac
gaccttgtcgtggatggtgcgatgaccgaccctaagggtgaccgtggtctctcgccttct
caacaagaagatcctgacttgtatctccgtattgtagaagtgcgcgaagacggtatcgtg
gtctccggagcaaaagctcaccagaccggtgctgtcaactctcacgagcacctcatcatg
cctaccatcgccatgaaggaagaggatgcagactatgcagtgtctttcgcagtgccaagc
gatgctgaaggtatcatcatgatctatggtcgtcagagctgtgacactcgcaagatggag
gaaggtgctgatatcgatgtcggtaactctcagttcggtggtcacgaagctcttgtcgtg
ttcgacaacgtattcgtgcctatggagcgtgtcttcatgtgccgtgagtatcagttcgca
ggccttatggtagaacgtttcgcaggttatcacagacagtcatacggtggttgtaaggta
ggtgtgggtgacgtcctcatcggggcagcggcacttgcagcggactacaacggtgtgcct
aaggcttctcacatcaaggataagctcatcgagatgatccatctcaacgagactctttac
tcttgcggtatcgcttgttcgtccgaaggtcacaagcttcctgcgggtaactacctcatc
gacctccttcttgccaacgtttgtaagcaaaacatcacacgtctgccttacgagatcgct
cgccttgccgaagatatcgcaggtggtcttatggtaaccatgccttcagagcaagatctt
cgtcaccctgtcacaggtcctatcgtgaagaagtaccttgtcggtgcgaagggtaagaat
gtcgaaaatcgtatgcgcatccttcgcctcatcgaaaacatcactctcggtacagcagct
gtgggctaccgtacagagtctatgcacggtgcgggttcgccacaggctcagcgtatcatg
atcgctcgccaaggtgatctcgaaggcaagaaggcactcgctcgcgaaatcgctcgcatc
gacgtgtctctcgataagtaa
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