Pseudomonas cavernae: D3880_16005
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Entry
D3880_16005 CDS
T08208
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcav
Pseudomonas cavernae
Pathway
pcav01501
beta-Lactam resistance
pcav02024
Quorum sensing
Module
pcav_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D3880_16005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_16005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_16005
01504 Antimicrobial resistance genes [BR:
pcav01504
]
D3880_16005
Transporters [BR:
pcav02000
]
Other transporters
Pores ion channels [TC:
1
]
D3880_16005
Antimicrobial resistance genes [BR:
pcav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3880_16005
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D3880_16005
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
D3880_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Pcf11_helical
Motif
Other DBs
NCBI-ProteinID:
AYC33766
UniProt:
A0A385Z3T8
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All DBs
Position
3512129..3513688
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AA seq
519 aa
AA seq
DB search
MPSHLPEHLRHFSPRPGPASVSSRLPRGLTFVSAFVIFSIIAGCMSTGGIAPHEQHLDAA
QLATDAAIQAANRDAGWPQERWWTQYGDPQLDAWIDNALQGNPTLAEAAARIRQALAIAG
ATEAAEAPQVNAEVKLQRHHWPTDFFYGPGELADTTSWNNEAALGLSYALDLWGRERSNS
ERAQNFAYMAAAEARAAQLELESNIVRTYVMLSLRYAQLDIGHAMLKQQQELLELAQRRL
RGGLGTEFEVSQAQVPLPETHRRIDALEEAIALNRNQLAALAGQGPGAAAAIKRPQLKLD
AAPGLPSQLPAELLGRRPDVVASRWQVAAQAKGVDVARAGFYPNVDLIASIGYNAVQGSM
LGFFKGSKFNYSVGPAVSLPIFDGGRLRGELGEAAAAYDAAVAQYNQTLVNALKDISDQL
IRLHSAEQQAKFAAQSVKAARTAYQLAQEAYEGGLTDYLNVLQAQTSLFQQQLTQQKVEA
TRLAVRADLLVALGGGLMASGDSPPPAGLVPQTVPVKAP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcccatctgcccgagcatttgcggcatttctctccccgcccaggaccagcaagc
gtgtcgtcacgactcccacgcggactgactttcgtcagcgcctttgtcattttctcaata
atcgccgggtgcatgagcactggcggcatcgccccgcacgagcagcatcttgacgccgcg
caactggccaccgatgccgccatccaggccgccaaccgcgatgccggctggccgcaggag
cgctggtggacccagtacggcgacccgcaactggacgcctggatcgacaacgcgctgcaa
ggcaacccgaccctggccgaggcggcggcgcgcatccgccaggcactggccatcgccggc
gcgaccgaggccgccgaagcgccacaggtcaacgccgaggtcaagctgcagcgccatcac
tggccgaccgacttcttctacggccccggcgagttggccgacaccaccagctggaacaac
gaggccgccctcggcctcagctatgccctggacctctggggccgcgagcgcagcaatagc
gagcgcgcacagaacttcgcctacatggccgccgccgaggcgcgggcggcgcagctggag
ctggagagcaacatcgtccgcacctacgtgatgctctcgctgcggtacgcccagctggac
atcggccacgccatgctcaagcagcagcaggagctgctcgagctcgcccaacgccgcctg
cgcggcgggctcggcaccgaattcgaggtcagccaggcgcaggtgccgctgccggaaacc
caccgcaggatcgacgccctggaagaagccatcgcgctcaaccgcaaccaactcgccgcc
ctcgccggccagggaccgggcgccgcggcggcgatcaagcgtccacagctgaagctggat
gccgctcccggtctgccttcgcaactgcccgccgaactgctcggccgccgcccggacgtg
gtcgccagccgctggcaggtcgccgcccaggccaaaggcgtggacgtggcccgcgccggc
ttctatcccaatgtcgacctaatcgccagcatcggctacaacgcggtccagggcagcatg
ctggggttcttcaagggcagcaaattcaactactcggtcggcccggccgtcagcctgccg
atcttcgacggcggccgcctgcgcggcgagctcggcgaggccgcggcggcctacgacgcg
gctgtcgcgcagtacaaccagacactggtgaacgccctcaaggacatctccgaccagctc
atccgcctgcactcggccgagcaacaggcgaagttcgccgcgcagtcggtcaaagccgcg
cgcaccgcctaccagctggcccaggaggcctacgagggcggcctgaccgactacctcaac
gtgctgcaggcgcagaccagcctgttccagcagcagctcacccagcagaaggtcgaggcc
acccgcctggcggtgcgcgccgatctgctggtggcgctcggcggcggcctgatggcgagc
ggcgacagcccgccgccggccgggctggtgccgcagaccgtcccggtcaaggcaccttga
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