Afipia carboxydohydrogena: AFIC_001768
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Entry
AFIC_001768 CDS
T08963
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax01501
beta-Lactam resistance
pcax02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFIC_001768
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AFIC_001768
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcax02000
]
AFIC_001768
01504 Antimicrobial resistance genes [BR:
pcax01504
]
AFIC_001768
Transporters [BR:
pcax02000
]
Other transporters
Pores ion channels [TC:
1
]
AFIC_001768
Antimicrobial resistance genes [BR:
pcax01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AFIC_001768
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AFIC_001768
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AFIC_001768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Vps54_N
Motif
Other DBs
NCBI-ProteinID:
WEF50239
LinkDB
All DBs
Position
complement(1809695..1811191)
Genome browser
AA seq
498 aa
AA seq
DB search
MRQLAPGFRVLGWGDALSAHALRACAIFTAALLLPGCILKQDLPDPAFDIPAAYQKDTTP
RKQDAPPALDWWRGFRSPELTALMEETQRVNLDIAAATARILQADALARTAGAALLPTLD
ANASATRSKSSSGFLNNGTAASRGTINTYSTSLSASYEVDLWAKNRDALLAAEKTADANR
FDRDTVALTSMVSVANAYFQVLAAQGRIATAQRNIASAQRIYDAIKARVDAGTGSDLDLA
QQESLLANQRASVPPLRQTLTQNINILATLVARPPERVHISGGSLARISAPRVTPGLPSE
LLTQRPDIRRQEAQLASATANVGSARAQFFPSIQLTGQGGYQSSALSALFMPQSAFFSLA
AGLTQPIFDAGRIQANFDLTKAQQDELLQTYRKTVISAFSDVDTALDAIKQTANRLRLQR
IVVKSSRRAFELSEKQLQAGTADIVTVLNTQQTLFTAEDTLQQAQLAWLQAYVSLFSALG
GGWEPKTVLSTMEPAHAL
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaactggcgccgggtttcagagttctgggttggggcgatgcgctgtcggcgcac
gcgctgcgggcctgcgcgattttcacggcggcgctgcttctgcccggctgcatcctgaag
caggacctgccggaccccgcgttcgatattcccgccgcgtatcagaaggacacgacgccc
cggaaacaggatgcgccgccagcgctcgactggtggcgcggcttccgctcaccggaactg
accgcgctgatggaggagacccagcgggtcaacctcgacatcgcggccgcgaccgcgcgc
atccttcaggccgacgcactggcacggacagcgggtgctgcgttgctgccgacgctcgac
gccaacgcatccgccacgcgctccaaatcttcgtcaggctttctcaacaacggcaccgcc
gcctcgcgcggcacgatcaacacctattcgacctcgctcagcgcgagctacgaagtcgat
ttgtgggccaagaaccgcgacgcgctgctcgcagccgaaaaaacagccgacgccaaccgt
ttcgatcgcgacaccgtggcgctcacatcgatggtgagcgtggccaacgcctatttccag
gtgctcgccgcgcagggccggatcgccaccgcgcagcgcaatatcgccagcgcccagcgc
atctacgatgcgatcaaggcccgtgtcgatgcgggcacgggttccgacctcgatcttgcg
cagcaggaaagcctgctcgccaaccagcgagcgtccgtgccgccgctgcgccagacgctg
acgcagaacatcaacattctggcgacgctggtggcgcggccgcccgaacgtgttcacatc
agtggcggctcgctcgcccgcatttcggcgccgcgcgtcacgcccggattaccatcggaa
cttctcacccagcgccccgacatccgccgtcaggaagcgcagcttgcctccgcgaccgcc
aatgtcggcagcgcgcgggcgcagttctttccgagcatccagttgaccgggcagggcggc
taccaaagctccgcgctctcggccctgttcatgccgcaatcggccttcttcagtcttgcg
gcgggcctgacgcagccgatcttcgatgcgggccgcatccaggccaatttcgatctgacc
aaggcacagcaggacgagttgttgcagacctatcgcaagacggtgatctcggcgttctcc
gatgtcgacaccgcgctcgacgccatcaagcagaccgctaaccgcctgcggctacagcgt
atcgtcgtaaaatcgtcccggcgggcgtttgaactgtcggaaaaacaattgcaggcgggc
accgccgatatcgtcaccgtgttaaacacgcagcagactctgttcaccgcggaggacacc
ttgcagcaggcgcaactggcgtggctgcaagcctatgtcagcctgttttcagccctcggg
ggcggatgggagccaaagacagtgttgagcacaatggagcccgcgcatgctctttaa
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