Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_003270
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Entry
PCC21_003270 CDS
T02320
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc01501
beta-Lactam resistance
pcc01503
Cationic antimicrobial peptide (CAMP) resistance
pcc02020
Two-component system
pcc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PCC21_003270
09132 Signal transduction
02020 Two-component system
PCC21_003270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCC21_003270
01503 Cationic antimicrobial peptide (CAMP) resistance
PCC21_003270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcc02000
]
PCC21_003270
02044 Secretion system [BR:
pcc02044
]
PCC21_003270
01504 Antimicrobial resistance genes [BR:
pcc01504
]
PCC21_003270
Transporters [BR:
pcc02000
]
Other transporters
Pores ion channels [TC:
1
]
PCC21_003270
Secretion system [BR:
pcc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PCC21_003270
RTX toxin transporter
PCC21_003270
Multiple protein transporter
PCC21_003270
RaxAB-RaxC type I secretion system protein
PCC21_003270
Antimicrobial resistance genes [BR:
pcc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PCC21_003270
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PCC21_003270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Csm1
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
AFR01730
LinkDB
All DBs
Position
complement(363807..365198)
Genome browser
AA seq
463 aa
AA seq
DB search
MKKLLPLLIGLSLGGFSAMSQAENLLQVYQQAKSTNPDLRSSAATRDAAFEKINESRSPL
LPQLGINAGYTYNKGYRDSNGVNNNEKSATLQLTQTLFDMSKWRALTLQEKQAGIEDVTY
QTAQQNLMLNTATAYFNVLRAIDSLSYINAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDSVLANEVLTRNTLDNALESLRQITGNFYPHLAGLNIERFSTQKPEAVNNLLKEAEN
RNLNLLSARLSQDLAREQIRSAETGYMPTLDLTASTGVSDTRYSGSRTNSGNFNDTDAGQ
HRVGINFTLPLYSGGATNSQVKQAQHSYVSASELLESAHRSVIQTVRSSFNNISASISSI
NAYKQAEVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYDYLINQLNIK
SAQGTLNEADLQALNASLGQPVSTTPTVTDNTAPQATTASAQR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccctcttctgattggtctgagcctgggcggttttagcgccatgagt
caggcggaaaacctgttacaagtctaccagcaggcaaaaagtaccaaccctgatttacgc
agctctgcggcaacccgcgacgccgcgtttgaaaaaattaacgaatcacgtagcccgtta
ctgccgcagttgggaatcaacgccggttatacctataacaaaggttaccgtgacagcaat
ggcgtcaacaacaacgagaaaagcgcgacattgcagttaacccagacgctgttcgacatg
tccaaatggcgtgcgctgacgttgcaggaaaaacaagcggggattgaagacgtcacctat
cagacagctcagcaaaacctgatgctgaacacggcgaccgcctatttcaacgtcctgcgt
gctattgactcgctgtcctacatcaatgcgcaaaagcaggcgatttatcgccagttggat
cagacaacacagcgcttcaacgtgggtctggttgcgattaccgacgtccagaacgcccgg
gctcagtatgacagcgtgctggcaaatgaagtgctgacccgcaatacgctggataacgcg
ttggaatccctgcgtcagatcaccggaaatttctacccacatctggccggcctgaacatc
gagcgtttctctacccagaaaccggaagcggttaataacctgctgaaagaagcggaaaat
cgcaacctgaacctgttgtccgcacgtttgagccaggatttggcacgtgagcagattcgc
tccgccgaaacaggctatatgccaacgctggatctcaccgcgtcaacaggggtgagcgat
actcgttactccggttcacggacgaatagcggcaacttcaacgacaccgacgccgggcaa
caccgagttggcattaacttcactctgccactgtatagcggtggcgcgaccaactctcag
gtgaaacaggcgcagcacagctacgtcagcgccagcgaactgctggaaagtgcacaccgt
tctgttatccaaacggtacgttcatcgtttaacaatatttccgcgtctatcagcagcatc
aacgcttacaaacaggctgaagtgtctgcacaaagctctctggatgcgatggaagcaggc
tatcaggtcggtacgcgtaccatcgttgacgtcctggatgcgaccactacgctgtataac
gccaaacagcagctctccagcgcacgttatgattacctgatcaatcagttaaacatcaaa
tccgcgcagggcacgctgaatgaagccgatctgcaggcgctgaatgcgtcactgggtcag
ccggtttcaacgacgccgactgtaaccgacaacacagctccgcaggccactaccgcctcg
gcgcagcgttaa
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