KEGG   Pseudomonas chlororaphis PA23: EY04_18090
Entry
EY04_18090        CDS       T03201                                 
Name
(GenBank) channel protein TolC
  KO
K12340  outer membrane protein
Organism
pch  Pseudomonas chlororaphis PA23
Pathway
pch01501  beta-Lactam resistance
pch01503  Cationic antimicrobial peptide (CAMP) resistance
pch02020  Two-component system
pch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EY04_18090
  09132 Signal transduction
   02020 Two-component system
    EY04_18090
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    EY04_18090
   01503 Cationic antimicrobial peptide (CAMP) resistance
    EY04_18090
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pch02000]
    EY04_18090
   02044 Secretion system [BR:pch02044]
    EY04_18090
   01504 Antimicrobial resistance genes [BR:pch01504]
    EY04_18090
Transporters [BR:pch02000]
 Other transporters
  Pores ion channels [TC:1]
   EY04_18090
Secretion system [BR:pch02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   EY04_18090
  RTX toxin transporter
   EY04_18090
  Multiple protein transporter
   EY04_18090
  RaxAB-RaxC type I secretion system protein
   EY04_18090
Antimicrobial resistance genes [BR:pch01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    EY04_18090
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    EY04_18090
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AIC20744
UniProt: A0AAP9VUP6
LinkDB
Position
complement(3984149..3985546)
AA seq 465 aa
MGAPSVLLGSAFMLAAGAALAQTAAVTSTGVSASTYSTDLMQLYREARLEDPQVLASFAQ
AQAGKEHQREALGALLPQLSLNAGTNRIHQENDLIQERSFDSESYSLVLRQYLYNKAAWE
NYQKFKSLAKQSESEALDTQAEAAVELARRYFTALAAEDELELVRAERRTTQKSLDRVNA
LYEKQMAMVTDQLDLKARVDLLAAQELDARNQARISREALAEIVGRPVKEKLNRIRNDAQ
LRVSAQSLESWVRDGMELNPTLKASESGAEAANAALRSGKGGHYPTVSLNLSAQQTNEGY
NNTLAPRTDSYVAGIGVQVPLYSGGSTSARVRGLYQDQLVAEQQLEAIRRRVVKEITSAY
LTANSNGEKIDASRSALASAQLSRVAAEKGLSYGMVNAVDVLASVRNEFRARRDLLKTQY
EFLSNVFSLNRWAGKPPVESVENVNAWLSPGSAGQAMGVGIEDQE
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtgggagcgccgtcagttctgctagggagtgcattcatgctggcagcgggggccgccttg
gcgcaaaccgctgcggtaacgtcgaccggggtcagcgcctcgacctattccaccgacctc
atgcagttgtatcgcgaggcgcggctggaggatccacaggtcctggcgtcttttgcgcaa
gcgcaggccggcaaggagcatcaacgcgaggcgctgggagcgctgttgccgcaactgtcg
ctgaatgccgggacgaaccggatccaccaggaaaacgacctgatacaggagcgcagtttc
gatagcgaaagctacagcctggtgctgcgccagtacctctacaacaaggccgcgtgggag
aactaccagaagttcaagagcctggccaagcagtccgaatccgaagcgctggatacccag
gccgaggccgcggtggaactggcgcggcgctacttcaccgcgctggcggccgaggatgag
ctggagctggtgcgggcggagcggcgaaccacgcaaaagagcctggaccgggtcaatgcg
ctgtacgaaaagcagatggcaatggttaccgaccagctcgacctcaaggcccgggtggac
ctgctcgcggcccaggagctggatgcccgcaaccaggcccgcatcagtcgcgaggcgctg
gcggaaatcgtcggccggccggtcaaggagaagctcaaccggattcgcaacgacgcgcaa
ctgcgggtgtcggcgcagagcctggagtcctgggtacgcgatggcatggagctgaacccg
acgctcaaggccagcgagagcggcgccgaagccgccaacgcagcgttgcgcagtggcaag
ggcgggcactatccgacggtgagcctgaacctcagcgcgcagcagaccaacgagggctac
aacaataccctggcgccacgcaccgacagctatgtcgccggcatcggcgtccaggtgccg
ctgtacagcggcggctcgacctcggcgcgggtccgtgggctctaccaggaccaactggtc
gccgagcagcagctggaagcgatccggcgccgggtggtcaaggagatcaccagcgcctac
ctgaccgccaattcgaacggcgagaagatcgacgccagccgttcggccctggcctcggcc
cagctgtcccgggtggcggcggagaaggggctgagctacggcatggtcaacgccgtcgat
gtactggccagcgtgcgcaacgagttccgcgcccggcgcgacctgctcaagacgcaatac
gagttcctcagcaacgtcttcagcctcaatcgctgggcgggcaaaccgccggtggaaagt
gtcgagaatgtgaatgcctggctcagtcccggtagcgccggccaggccatgggcgttggc
atcgaggaccaggagtag

DBGET integrated database retrieval system