Pseudomonas chlororaphis PA23: EY04_18090
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Entry
EY04_18090 CDS
T03201
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch01501
beta-Lactam resistance
pch01503
Cationic antimicrobial peptide (CAMP) resistance
pch02020
Two-component system
pch03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EY04_18090
09132 Signal transduction
02020 Two-component system
EY04_18090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EY04_18090
01503 Cationic antimicrobial peptide (CAMP) resistance
EY04_18090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_18090
02044 Secretion system [BR:
pch02044
]
EY04_18090
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_18090
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_18090
Secretion system [BR:
pch02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EY04_18090
RTX toxin transporter
EY04_18090
Multiple protein transporter
EY04_18090
RaxAB-RaxC type I secretion system protein
EY04_18090
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EY04_18090
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EY04_18090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIC20744
UniProt:
A0AAP9VUP6
LinkDB
All DBs
Position
complement(3984149..3985546)
Genome browser
AA seq
465 aa
AA seq
DB search
MGAPSVLLGSAFMLAAGAALAQTAAVTSTGVSASTYSTDLMQLYREARLEDPQVLASFAQ
AQAGKEHQREALGALLPQLSLNAGTNRIHQENDLIQERSFDSESYSLVLRQYLYNKAAWE
NYQKFKSLAKQSESEALDTQAEAAVELARRYFTALAAEDELELVRAERRTTQKSLDRVNA
LYEKQMAMVTDQLDLKARVDLLAAQELDARNQARISREALAEIVGRPVKEKLNRIRNDAQ
LRVSAQSLESWVRDGMELNPTLKASESGAEAANAALRSGKGGHYPTVSLNLSAQQTNEGY
NNTLAPRTDSYVAGIGVQVPLYSGGSTSARVRGLYQDQLVAEQQLEAIRRRVVKEITSAY
LTANSNGEKIDASRSALASAQLSRVAAEKGLSYGMVNAVDVLASVRNEFRARRDLLKTQY
EFLSNVFSLNRWAGKPPVESVENVNAWLSPGSAGQAMGVGIEDQE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgggagcgccgtcagttctgctagggagtgcattcatgctggcagcgggggccgccttg
gcgcaaaccgctgcggtaacgtcgaccggggtcagcgcctcgacctattccaccgacctc
atgcagttgtatcgcgaggcgcggctggaggatccacaggtcctggcgtcttttgcgcaa
gcgcaggccggcaaggagcatcaacgcgaggcgctgggagcgctgttgccgcaactgtcg
ctgaatgccgggacgaaccggatccaccaggaaaacgacctgatacaggagcgcagtttc
gatagcgaaagctacagcctggtgctgcgccagtacctctacaacaaggccgcgtgggag
aactaccagaagttcaagagcctggccaagcagtccgaatccgaagcgctggatacccag
gccgaggccgcggtggaactggcgcggcgctacttcaccgcgctggcggccgaggatgag
ctggagctggtgcgggcggagcggcgaaccacgcaaaagagcctggaccgggtcaatgcg
ctgtacgaaaagcagatggcaatggttaccgaccagctcgacctcaaggcccgggtggac
ctgctcgcggcccaggagctggatgcccgcaaccaggcccgcatcagtcgcgaggcgctg
gcggaaatcgtcggccggccggtcaaggagaagctcaaccggattcgcaacgacgcgcaa
ctgcgggtgtcggcgcagagcctggagtcctgggtacgcgatggcatggagctgaacccg
acgctcaaggccagcgagagcggcgccgaagccgccaacgcagcgttgcgcagtggcaag
ggcgggcactatccgacggtgagcctgaacctcagcgcgcagcagaccaacgagggctac
aacaataccctggcgccacgcaccgacagctatgtcgccggcatcggcgtccaggtgccg
ctgtacagcggcggctcgacctcggcgcgggtccgtgggctctaccaggaccaactggtc
gccgagcagcagctggaagcgatccggcgccgggtggtcaaggagatcaccagcgcctac
ctgaccgccaattcgaacggcgagaagatcgacgccagccgttcggccctggcctcggcc
cagctgtcccgggtggcggcggagaaggggctgagctacggcatggtcaacgccgtcgat
gtactggccagcgtgcgcaacgagttccgcgcccggcgcgacctgctcaagacgcaatac
gagttcctcagcaacgtcttcagcctcaatcgctgggcgggcaaaccgccggtggaaagt
gtcgagaatgtgaatgcctggctcagtcccggtagcgccggccaggccatgggcgttggc
atcgaggaccaggagtag
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