Pseudomonas chlororaphis PA23: EY04_20265
Help
Entry
EY04_20265 CDS
T03201
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch01501
beta-Lactam resistance
pch01503
Cationic antimicrobial peptide (CAMP) resistance
pch02020
Two-component system
pch03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EY04_20265
09132 Signal transduction
02020 Two-component system
EY04_20265
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EY04_20265
01503 Cationic antimicrobial peptide (CAMP) resistance
EY04_20265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_20265
02044 Secretion system [BR:
pch02044
]
EY04_20265
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_20265
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_20265
Secretion system [BR:
pch02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EY04_20265
RTX toxin transporter
EY04_20265
Multiple protein transporter
EY04_20265
RaxAB-RaxC type I secretion system protein
EY04_20265
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EY04_20265
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EY04_20265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIC21155
LinkDB
All DBs
Position
complement(4481534..4482946)
Genome browser
AA seq
470 aa
AA seq
DB search
MTHSPRFFSPLLILALVTIPAFADPGAQRAELLQVYRQAVEHDAQLSAARHEYQAQRESI
PQARAGLLPTLNAGSTVESVRLERDEPGLTRTRSTTVFQANLNQPLFRADRWFQLEAAHA
STAQAELELGAKEQGLVLTTAQAYFETLRALDLLAASKAEEAALERQQQQAQARLENGAS
SITDVLDAQAAHDNAGANRKLAERKVDDAFEALSRLTRQDYSTIEGIQHQLPVELPVPND
ANEWVSRAVRQNLALQASSYAVIAAEQTNRQRKAGYAPTVDAVASWRKGENDSFGYSNPT
DFGRDGYRGNVTQSSIGLELNIPLYSGGMTRSQVREATERLAQSEDEREDRRREVVQNTR
NFYRAVNSDIEQVIARRQTIRSGQASVKANQVGRDLGSRNTADVLNAQRQLYSAVREYNN
ARYDYIIDTLKLKQAAGTLSPKDLSDLAMYLTKDYDADRDFLPPQERKAL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacccactccccccgttttttctcgccattgctcatcctggcactggtgacgatcccg
gctttcgccgatccaggtgcccagcgcgccgagctgctgcaggtttaccgccaggccgtc
gagcatgacgcccagctgtccgcggcgcgccacgagtaccaggcccagcgcgaaagcatc
ccccaggcccgggccgggttactgcccacgctcaatgccggcagcactgtggaatcggtg
cgtctggagcgggatgagccgggcctgacccgcacgcgcagcaccacggtgttccaggcc
aatctcaaccagccgctgttccgtgccgatcgctggtttcaattggaagccgcccacgcc
agcaccgcccaggccgaacttgaattgggcgcgaaggagcaggggctggtgctgaccacg
gcccaggcctatttcgaaaccttgcgtgccctggacctgctcgccgcctccaaggccgag
gaagcggcgctcgagcgtcagcagcaacaggcccaggcccgcctggagaatggcgcctcg
agcatcaccgatgtgctcgacgcccaggccgcccatgacaacgccggcgccaatcgcaaa
ctcgccgagcgcaaggtcgacgatgccttcgaggccttgtcccgcttgacccgccaggac
tattcgacgatcgagggtattcagcatcaactgccggtggaactgccggtgcccaacgat
gccaacgaatgggtcagccgcgcggtgcgccagaacctggcgttgcaagccagcagctac
gcggtgattgccgccgaacagaccaaccgccagcgcaaggctggttatgcgccgaccgtc
gatgccgtggcgtcctggcgcaaaggtgaaaacgacagcttcggctacagcaaccccacc
gacttcgggcgggatggctatcgaggcaatgtcacgcaaagcagcatcggcctggagctg
aatattccgctgtactccggcggcatgacccgttcccaggtgcgcgaagcgaccgagcgg
ctggcccagagtgaagacgagcgcgaggaccgccgccgcgaagtggtgcagaacacgcgt
aatttctaccgcgcggtgaattccgatatcgagcaggtcattgcccgccggcagacgatt
cgttccggccaggcttcggtcaaggccaaccaggtcgggcgcgacctgggctcgcgcaac
accgcggatgtgctcaatgcccagcgccagctgtacagcgcggtgcgtgagtacaacaac
gcgcgctacgactacatcatcgacaccctcaagctcaagcaggcggcgggaaccctgagc
ccgaaagacctgagcgacctggcgatgtacctgacgaaagactacgacgccgaccgggat
ttcctgccaccgcaggagcgcaaggcgctctga
DBGET
integrated database retrieval system
