Pseudomonas chlororaphis PA23: EY04_20730
Help
Entry
EY04_20730 CDS
T03201
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch01501
beta-Lactam resistance
pch02024
Quorum sensing
Module
pch_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EY04_20730
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EY04_20730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pch02000
]
EY04_20730
01504 Antimicrobial resistance genes [BR:
pch01504
]
EY04_20730
Transporters [BR:
pch02000
]
Other transporters
Pores ion channels [TC:
1
]
EY04_20730
Antimicrobial resistance genes [BR:
pch01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EY04_20730
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EY04_20730
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
EY04_20730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
BrnA_antitoxin
DUF5344
Motif
Other DBs
NCBI-ProteinID:
AIC21243
UniProt:
A0A7S5HRI1
LinkDB
All DBs
Position
4581082..4582491
Genome browser
AA seq
469 aa
AA seq
DB search
MKAPLSLIAASLLLVACSGPAPRPDSGLQAPPAWHSPHTAAAQQDNRQWWTRFGSPELER
LVEQARLGSHDLAAAMARVRQAQASAVIAGAPLLPAVNGTFNANRQKLMRGNGYSQLNAD
SNNKAVDYFDAGLSASYEIDFWGGKRAARDSALLGVQASEFDQATVELTLLSGVANSYAQ
VLSLREQSRIAELNLANAQSVLRLVQTRYDSGSATALELAQQKSLVAAQQRQVPLVRQQT
EEALITLAALLGRPVQSLTLSDQPLARLNWPDIDAGVPSDLLARRPDIAGAEARLAAARA
DVKVARAAMLPSVTLTANLGSGANQFDDVLRSPFYNLTAGLVAPIFNNGRLSAERDRATA
RQQELLESYRAAIVNGFADVEKALNSIRGLDQQRQWQDEELRQAQRAFEISQSRYQAGAA
DLLTVLETQRTLYTAQDQNVQLRLSRVQSSIALYKALGGGWKTLETKKR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcccctcagccttatcgccgccagcctgttgctggtggcctgcagcggcccc
gcgccgcgcccggacagtggcttgcaggcaccgcccgcctggcactcgccgcataccgcg
gccgcgcagcaggacaaccggcaatggtggacccgcttcggcagcccggaactggagcgc
ctggtcgaacaggcccgcctgggcagccacgacctggccgccgccatggcccgggtgcgc
caggcgcaggccagtgccgtcattgccggcgcgcccttgttgcccgccgtcaacggcacc
ttcaacgccaaccgccagaagctcatgcggggcaacggctacagccagctgaatgccgac
agcaacaacaaggccgtggactatttcgatgccggcctgagcgccagctatgaaatcgat
ttctggggcggcaagcgtgccgcccgggacagcgcgctgctgggcgtgcaggccagcgaa
ttcgaccaggccaccgtggagctgaccctgctcagcggcgtggccaacagttacgcccag
gtgctgtcgctgcgcgagcagagccgcatcgccgaactcaacctggccaatgcgcaaagc
gtgctcaggctggtgcagacccgctacgactcgggctcggccaccgccctggagctggcc
cagcagaagagcctggtggcggcgcagcaacgccaggtgccgctggttcggcaacagacc
gaagaagccctgatcaccctcgccgccctcctcggccggccggtacagagcctgaccttg
agcgaccagcctttagcccgactgaactggccggacatcgatgccggggtgcccagcgac
ctgctggcccgccgccccgatatcgccggcgccgaagcccggctggcggcggcccgggcc
gatgtcaaagtggcgcgggcggcgatgctgcccagcgtgaccctgaccgccaacctcggc
tccggcgccaaccagttcgatgacgtgctacgcagccccttctacaacctgaccgccggg
ctggtggcgccgatcttcaacaatgggcgcctgagtgccgagcgcgaccgggccacggcc
cgccagcaggaactgctggaaagctaccgcgcagcgatcgtcaatggcttcgccgatgtg
gaaaaggccctcaacagcattcgcggcctggaccagcagcggcaatggcaagacgaagaa
ctgaggcaggcgcaacgcgccttcgagatatcccagagccgctaccaggccggcgccgcc
gacctgctcacagtcctggaaacccagcgcaccctgtacaccgcacaagaccagaacgtg
caactgcggctgtcccgggtgcagtcgagcattgccctgtacaaagccctgggcggtggc
tggaagacactcgaaacgaagaagcgctga
DBGET
integrated database retrieval system
