Pseudomonas cichorii: PCH70_05300
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Entry
PCH70_05300 CDS
T03002
Name
(GenBank) outer membrane efflux protein TolC, putative
KO
K12340
outer membrane protein
Organism
pci
Pseudomonas cichorii
Pathway
pci01501
beta-Lactam resistance
pci01503
Cationic antimicrobial peptide (CAMP) resistance
pci02020
Two-component system
pci03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PCH70_05300
09132 Signal transduction
02020 Two-component system
PCH70_05300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCH70_05300
01503 Cationic antimicrobial peptide (CAMP) resistance
PCH70_05300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_05300
02044 Secretion system [BR:
pci02044
]
PCH70_05300
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_05300
Transporters [BR:
pci02000
]
Other transporters
Pores ion channels [TC:
1
]
PCH70_05300
Secretion system [BR:
pci02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PCH70_05300
RTX toxin transporter
PCH70_05300
Multiple protein transporter
PCH70_05300
RaxAB-RaxC type I secretion system protein
PCH70_05300
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PCH70_05300
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PCH70_05300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHF65683
LinkDB
All DBs
Position
complement(577715..579154)
Genome browser
AA seq
479 aa
AA seq
DB search
MLRKLSLVIAVSCAGSVQALAADAPLPTKTGLVNVYQQAVDNNADLAAARADYDARKEVV
PQARAGLLPNLSASAQANNTRTSIDQPSAIATRSGTVYQATLSQPIFRADRWFQLQAAEA
VNEQAALELSATEQNLILESAQSYFAVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLS
DKTDVLQAQASYDTARANRIIAKRQVDDAFQALVTLTNREYNSIEGIVHTLPVLAPIPND
AKAWVDTAAQQNLNLLASNYAVSAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPN
YTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYSRLTQSEQRRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRNYNNT
RYDYIIDNLRLKQAAGTLNPGDLQDLSRYLKSDYNPDKDFLPPDLAAAAQKNFEKPAQR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaaactttcgttggtcattgccgtgtcgtgtgccggcagcgtacaggccctg
gccgcggatgcgccccttccgaccaagaccggactggtcaacgtttatcaacaggccgta
gataacaatgccgatcttgcggctgcccgcgccgattacgatgcccgcaaggaagtcgtg
ccccaggctcgcgccggcttgctgcccaacctttcggcaagcgcacaggccaacaacacc
cgcaccagcatcgaccagcccagcgccattgcaacccgcagcggcacggtctatcaagcg
accctgagccagccgatcttccgcgccgaccgctggttccagttgcaggccgccgaggcc
gtcaatgagcaagcggcactggaactctcggccaccgagcagaacctgatcctggagtca
gcccagagttacttcgcagtcttgcgcgcccaggacaacctggcttcgaccaaggccgaa
gaagccgccttcaagcggcagctggatcaggccaacgaacggttcgatgtcggcctttcc
gacaagaccgatgtgctgcaagcacaggccagttacgacactgcacgggccaaccggatc
attgccaagcgtcaggtggacgatgccttccaggcgctggtgacactgaccaatcgcgaa
tacaactccatcgaaggaatcgtccacaccttgccggtgctggcgccgatccccaacgat
gccaaggcctgggtcgataccgccgcccaacagaacctgaacctgctggccagcaactat
gccgtcagcgcagccgaggaaaccctgcgccagcgcaaggccggtcatgcaccgaccctt
gatgcggtcgccacttaccagcgcggcgacaacgatgcactgggcttcagcaaccccaac
tacacgggtcgcaattatggcggcgatgtggagcaacgcagcatcggcgtgcagttgaat
atcccgatctacagcggtggcctgaccagttcgcaggttcgcgaagcctactcacgcctg
acccagagcgagcagcgtcgtgaaagcctgcgccgtcaagtggtggaaaacacccgcaac
ctgcaccgcgccgtgaataccgatgtggaacaggtgcaggctcgcaagcagtcgatcatc
tccaaccagagtgctctggaagccacggaaatcggctatcaggtcggcacccgcaatatc
gtcgacgtactcgatgctcagcgtcagctatatgcctcggtgcgtaattacaacaacacc
cgctatgactacatcatcgataacctgcgcctgaaacaggcggctggcaccctgaacccg
ggagatttgcaggacctgtcgcgctacctgaaatccgactacaacccggacaaggacttc
ctgccaccggatctggcggcagcggcgcagaagaatttcgagaagccagcacagcggtaa
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