Pseudomonas cichorii: PCH70_09790
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Entry
PCH70_09790 CDS
T03002
Name
(GenBank) efflux transporter, outer membrane factor lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pci
Pseudomonas cichorii
Pathway
pci01501
beta-Lactam resistance
pci02024
Quorum sensing
Module
pci_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCH70_09790
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCH70_09790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_09790
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_09790
Transporters [BR:
pci02000
]
Other transporters
Pores ion channels [TC:
1
]
PCH70_09790
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCH70_09790
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PCH70_09790
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PCH70_09790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SidC_N
Motif
Other DBs
NCBI-ProteinID:
AHF66132
LinkDB
All DBs
Position
1080300..1081634
Genome browser
AA seq
444 aa
AA seq
DB search
MPLDSLATDQAIQSAAMDANWPDAQWWRAYGDPQLNRWIALATQGSPSLAMAAARVRQAK
ALAGIAESAEGLHVDSSANLARHDWPTDQFYGPGELANTRTWDNNASLGLSYALDLWGRE
SNASEQALDLAHMSAAEQRQAQLELQENIVRAYIQLALHYARLDIVEATLAQQKQILDLA
QRRLKGGIGTHFEVSQAETPLPETHRQIDELEEAIALERNQLAVLAGKGPGEGAGLLRPS
LSLHTALKLPSALPAQLLGQRPDVVASRWRVEAQARGVDVAHAGFYPNVDLVGSLGYMAT
GGGMLEFLTGSKLSYKAGPAISLPIFDGGRLRAELGQAVAGYDLAVAHYNQTLVMALKSI
SDQLIRRASMDKQQVFAAESVAAAQKTYDIALIAYQRGLTDYLNVLNAQTLLFRQQQIQQ
QIEAARLSVYAGLVVALGGGLPDE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ttgcccctcgacagcctggccaccgatcaggctatccagagcgctgccatggacgccaac
tggcctgacgctcagtggtggcgtgcctatggcgacccccagttgaaccgctggatagcg
ctggcaactcagggcagtccgagcctggcgatggctgccgcgcgcgtgcgtcaggcaaag
gcgctggccgggattgccgaatccgccgaaggtctgcatgtcgacagcagtgccaatctg
gctcgtcatgactggccgaccgatcaattctatgggcctggcgaactggccaatactcgc
acctgggacaacaatgcatcgctgggtttgagttacgccctcgatctttggggccgcgaa
agcaacgccagcgaacaagcgcttgacttggcgcacatgagtgcggccgagcaacgtcag
gcccaacttgaattgcaggaaaatatcgtccgcgcctatatccagctggctctgcactac
gcccggctggatatcgtcgaagccacgctggcccagcagaagcagattctcgatctggcc
cagcgtcgtttgaaaggcggcatcggtacgcatttcgaggtcagccaggccgaaacacct
ctgccggaaacccatcggcaaatcgacgagctggaagaagccattgcgctggagcgtaat
caactggccgttctggcgggcaaggggccgggtgagggcgctgggctgctacgcccgagc
ctgtcgctgcacaccgcactcaaactgccttcggcattgcctgcgcaactgctgggccag
cgcccggatgtggttgccagccgctggcgtgtcgaggcgcaggcgcgtggagtcgatgtg
gcgcatgcgggtttctatcccaacgtcgatcttgtcggcagccttggctatatggccacg
ggcggcgggatgctggagtttctgaccggcagcaagctcagctataaagccggcccggca
atcagcctgccgatcttcgacggtggacgcctgcgagcggagctgggccaggccgtggcg
ggttatgacctggccgtggcccattacaaccagacactggtgatggccctcaaaagcatt
tccgatcagttgatccgccgtgcctccatggacaagcagcaggtgttcgccgccgagtcc
gtcgcggcagcccagaagacctatgacattgccttgatcgcctatcagcgcggcctgacc
gactacctgaacgtgctcaatgcccagacgctgttgtttcgtcagcaacagattcagcag
cagatcgaagccgctcgcctgagtgtgtacgccgggctggtggtggcgctgggcggcggg
cttcctgatgaataa
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