Pseudomonas cichorii: PCH70_25380
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Entry
PCH70_25380 CDS
T03002
Name
(GenBank) outer membrane efflux protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pci
Pseudomonas cichorii
Pathway
pci01501
beta-Lactam resistance
pci02024
Quorum sensing
Module
pci_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PCH70_25380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PCH70_25380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pci02000
]
PCH70_25380
01504 Antimicrobial resistance genes [BR:
pci01504
]
PCH70_25380
Transporters [BR:
pci02000
]
Other transporters
Pores ion channels [TC:
1
]
PCH70_25380
Antimicrobial resistance genes [BR:
pci01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PCH70_25380
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PCH70_25380
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PCH70_25380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHF67691
LinkDB
All DBs
Position
complement(2964047..2965504)
Genome browser
AA seq
485 aa
AA seq
DB search
MKYFLLSALAASVLGGCSLIPDYQRPPAPVAASYPTGTAYATGVTASAGQAAAEQGWRNF
FRDPVLGQLIESSLSNNRDLRVAVLNLEAYQAQHRIQRSDLFPAVSVSGSGTRQSLPADL
SGVNKRAISSSYSTTLGISAYELDLFGRNRSLSREDLEIYLSSEQARRSTQLSLVANVAN
AYLTWRADQEQLRLTSDTLQTYEQSLNLTLQQGSAGTASALAISQARTSVESARARLAQY
ERLVAQDLNALTLLVGASVSDTLPAQPLSSELLGSVPAGLPSELLQRRPDILQAEYLLKA
ANANIGAARAAFFPSISLTANAGTSSTALSGLFKAGSGGWLFQPQINIPIFNAGNLRASL
DYSKIQKDIRVAQYEKSIQTAFQEVADGLAARQTYTEQLIAQRDSLKANEDYYRLAEARY
RSGLDSSLTLLDAQRSLFTAQSTLISDRLAQLTAEINLYKALGGGWHEYTTPASLPPAPH
QAPPA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacttcctactcagcgccctggcggcttcagtgcttggcggttgctctctcatt
cccgactatcaacgcccgcccgcacctgtagctgcaagctatccgactggtacagcctat
gcgacaggtgttactgcgtctgcaggtcaggcagcggcggaacaaggctggcgaaacttc
tttcgtgacccggtacttggccaactgatcgaaagctcgttgtccaataaccgcgacttg
cgcgtggccgtactcaatctcgaggcctatcaggctcagcaccgcatacaacgcagcgac
ctgtttcctgctgtttcggtgagcgggtcaggcacgcgacagagccttcctgccgatttg
tctggagtcaacaagcgcgccatcagcagctcctactccaccacattgggtatcagcgcc
tacgagctggacctgttcggccgcaaccgcagtctttcccgtgaagatctggaaatctat
ctttccagcgaacaggcacggcgcagtacgcaactgagtcttgtggccaacgtggcaaac
gcttacctcacctggcgtgcagatcaggaacaactcaggctcaccagtgacaccctgcaa
acctatgagcagagtctcaatctgaccctgcagcaaggatcggcaggcactgcatcggcc
ctggccatcagccaggctcgtacatccgtggaaagtgcgcgggcacgcctggcgcaatac
gaaagactggttgcccaggacctcaatgccctgacactgctggtgggtgccagtgtttcg
gatacgctgccggcgcagcccttgagcagcgagcttcttggcagcgtacccgcgggcttg
ccttcggaactgttacagcgtcgcccggacattctccaagccgaatacctgctcaaagcc
gccaatgccaatatcggcgctgcgcgggccgcattctttcccagtatcagcctgactgcc
aatgcaggcacctcaagtactgcgctgtcggggttgttcaaggcgggttcagggggttgg
ctgttccagccacagatcaacattccgatcttcaatgccggcaacctgcgcgccagcctg
gactactcgaaaatccagaaagatatccgggtcgcacagtatgagaaaagcatccagacc
gcattccaggaagtcgccgatggcctggcggcaaggcagacctacacagaacaactgatc
gcgcagcgtgactcactcaaagccaacgaggactactaccggctggcagaggcacgttac
agaagcggccttgatagcagccttaccctgctggatgcccagcgctcgctgttcaccgct
caatcgacactgatctcggaccgtctcgcccaattgacggccgaaatcaacctttacaag
gcgctaggtggtggctggcatgaatacaccaccccggcaagcctcccacccgcgcctcac
caggcaccgccagcgtaa
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